Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN6P56747 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN6P56747 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN6P56747 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLDN6P56747 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN6P56747 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CLDN6P56747 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN6P56747 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CLDN6P56747 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN6P56747 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN6P56747 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
CLDN6P56747 PAUPAR-201ENST00000630360 2965 ntBASIC14.44□□□□□ -0.1
CLDN6P56747 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN6P56747 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
CLDN6P56747 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN6P56747 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN6P56747 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN6P56747 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CLDN6P56747 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLDN6P56747 AC010491.1-201ENST00000563101 2797 ntBASIC14.44□□□□□ -0.1
CLDN6P56747 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN6P56747 KLF2P1-201ENST00000447438 1042 ntBASIC14.44□□□□□ -0.1
CLDN6P56747 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN6P56747 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN6P56747 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN6P56747 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.44□□□□□ -0.1
CLDN6P56747 AC009955.4-201ENST00000597192 544 ntBASIC14.44□□□□□ -0.1
CLDN6P56747 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.44□□□□□ -0.1
CLDN6P56747 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN6P56747 AC011491.1-203ENST00000637688 543 ntBASIC14.44□□□□□ -0.1
CLDN6P56747 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN6P56747 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.44□□□□□ -0.1
CLDN6P56747 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN6P56747 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN6P56747 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN6P56747 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN6P56747 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN6P56747 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN6P56747 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
CLDN6P56747 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.43□□□□□ -0.1
CLDN6P56747 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.43□□□□□ -0.1
CLDN6P56747 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CLDN6P56747 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CLDN6P56747 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 AC024909.3-201ENST00000611513 2257 ntBASIC14.43□□□□□ -0.1
CLDN6P56747 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.43□□□□□ -0.1
CLDN6P56747 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.43□□□□□ -0.1
CLDN6P56747 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.43□□□□□ -0.1
CLDN6P56747 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.43□□□□□ -0.1
CLDN6P56747 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.43□□□□□ -0.1
CLDN6P56747 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.43□□□□□ -0.1
CLDN6P56747 TUBB8P8-201ENST00000458717 1058 ntBASIC14.43□□□□□ -0.1
CLDN6P56747 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN6P56747 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms