Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CDH4P55283 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.38■□□□□ 0.05
CDH4P55283 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH4P55283 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.38■□□□□ 0.05
CDH4P55283 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH4P55283 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH4P55283 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.38■□□□□ 0.05
CDH4P55283 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.38■□□□□ 0.05
CDH4P55283 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CDH4P55283 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 TUBB1P2-201ENST00000422712 1306 ntBASIC15.38■□□□□ 0.05
CDH4P55283 TUBB1P1-201ENST00000503144 1300 ntBASIC15.38■□□□□ 0.05
CDH4P55283 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
CDH4P55283 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH4P55283 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 INE2-201ENST00000630399 1874 ntBASIC15.37■□□□□ 0.05
CDH4P55283 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.37■□□□□ 0.05
CDH4P55283 AJ011931.1-201ENST00000618749 2492 ntBASIC15.37■□□□□ 0.05
CDH4P55283 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.37■□□□□ 0.05
CDH4P55283 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.37■□□□□ 0.05
CDH4P55283 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.37■□□□□ 0.05
CDH4P55283 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.37■□□□□ 0.05
CDH4P55283 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CDH4P55283 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.37■□□□□ 0.05
CDH4P55283 AL355994.2-201ENST00000447882 704 ntBASIC15.37■□□□□ 0.05
CDH4P55283 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.37■□□□□ 0.05
CDH4P55283 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.37■□□□□ 0.05
CDH4P55283 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.37■□□□□ 0.05
CDH4P55283 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.37■□□□□ 0.05
CDH4P55283 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CDH4P55283 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.37■□□□□ 0.05
CDH4P55283 AP006547.1-201ENST00000563435 692 ntBASIC15.37■□□□□ 0.05
CDH4P55283 PPY2P-201ENST00000582808 702 ntBASIC15.37■□□□□ 0.05
CDH4P55283 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 AL033527.4-201ENST00000641026 673 ntBASIC15.37■□□□□ 0.05
CDH4P55283 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
CDH4P55283 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CDH4P55283 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CDH4P55283 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.37■□□□□ 0.05
CDH4P55283 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.37■□□□□ 0.05
CDH4P55283 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.37■□□□□ 0.05
CDH4P55283 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.37■□□□□ 0.05
CDH4P55283 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
CDH4P55283 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDH4P55283 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH4P55283 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH4P55283 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
CDH4P55283 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 KRT8P4-201ENST00000509735 1454 ntBASIC15.36■□□□□ 0.05
CDH4P55283 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.36■□□□□ 0.05
CDH4P55283 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH4P55283 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.36■□□□□ 0.05
CDH4P55283 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CDH4P55283 RN7SL560P-201ENST00000577943 264 ntBASIC15.36■□□□□ 0.05
CDH4P55283 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.36■□□□□ 0.05
CDH4P55283 AC009542.2-202ENST00000619004 1067 ntBASIC15.36■□□□□ 0.05
CDH4P55283 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDH4P55283 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms