Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.48■□□□□ 0.23
CLCN3P51790 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 AC009955.4-201ENST00000597192 544 ntBASIC16.48■□□□□ 0.23
CLCN3P51790 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.48■□□□□ 0.23
CLCN3P51790 KRT8P29-201ENST00000420409 1371 ntBASIC16.48■□□□□ 0.23
CLCN3P51790 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCN3P51790 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCN3P51790 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.48■□□□□ 0.23
CLCN3P51790 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CLCN3P51790 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN3P51790 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCN3P51790 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.47■□□□□ 0.23
CLCN3P51790 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLCN3P51790 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCN3P51790 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CLCN3P51790 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCN3P51790 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CLCN3P51790 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.47■□□□□ 0.23
CLCN3P51790 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.47■□□□□ 0.23
CLCN3P51790 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.47■□□□□ 0.23
CLCN3P51790 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCN3P51790 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCN3P51790 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCN3P51790 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.47■□□□□ 0.23
CLCN3P51790 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.47■□□□□ 0.23
CLCN3P51790 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.47■□□□□ 0.23
CLCN3P51790 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.47■□□□□ 0.23
CLCN3P51790 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CLCN3P51790 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 AC022748.3-201ENST00000621828 275 ntBASIC16.47■□□□□ 0.23
CLCN3P51790 AL162426.1-201ENST00000624141 743 ntBASIC16.47■□□□□ 0.23
CLCN3P51790 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCN3P51790 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.47■□□□□ 0.23
CLCN3P51790 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCN3P51790 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CLCN3P51790 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCN3P51790 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN3P51790 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLCN3P51790 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.47■□□□□ 0.23
CLCN3P51790 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN3P51790 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.46■□□□□ 0.23
CLCN3P51790 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN3P51790 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.46■□□□□ 0.23
CLCN3P51790 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.46■□□□□ 0.23
CLCN3P51790 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN3P51790 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN3P51790 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN3P51790 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CLCN3P51790 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN3P51790 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.46■□□□□ 0.23
CLCN3P51790 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN3P51790 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CLCN3P51790 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CLCN3P51790 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.46■□□□□ 0.23
CLCN3P51790 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.46■□□□□ 0.23
CLCN3P51790 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.46■□□□□ 0.23
CLCN3P51790 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN3P51790 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CLCN3P51790 AC010141.1-201ENST00000411585 623 ntBASIC16.46■□□□□ 0.23
CLCN3P51790 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN3P51790 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.46■□□□□ 0.23
CLCN3P51790 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.46■□□□□ 0.23
CLCN3P51790 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN3P51790 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN3P51790 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN3P51790 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.46■□□□□ 0.23
CLCN3P51790 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.46■□□□□ 0.23
CLCN3P51790 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.46■□□□□ 0.23
CLCN3P51790 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN3P51790 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.46■□□□□ 0.23
CLCN3P51790 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CLCN3P51790 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLCN3P51790 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms