Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GPC3P51654 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC3P51654 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.62■□□□□ 0.25
GPC3P51654 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.62■□□□□ 0.25
GPC3P51654 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC3P51654 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
GPC3P51654 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC3P51654 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GPC3P51654 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
GPC3P51654 AC063926.3-201ENST00000624734 5658 ntBASIC16.62■□□□□ 0.25
GPC3P51654 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GPC3P51654 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC3P51654 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.62■□□□□ 0.25
GPC3P51654 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC3P51654 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.62■□□□□ 0.25
GPC3P51654 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC3P51654 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GPC3P51654 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
GPC3P51654 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.62■□□□□ 0.25
GPC3P51654 GPAA1P2-201ENST00000417923 928 ntBASIC16.62■□□□□ 0.25
GPC3P51654 AC079178.1-201ENST00000420915 656 ntBASIC16.62■□□□□ 0.25
GPC3P51654 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.62■□□□□ 0.25
GPC3P51654 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.62■□□□□ 0.25
GPC3P51654 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.62■□□□□ 0.25
GPC3P51654 ZACNP1-201ENST00000612259 710 ntBASIC16.62■□□□□ 0.25
GPC3P51654 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.62■□□□□ 0.25
GPC3P51654 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
GPC3P51654 AL008638.5-201ENST00000623814 1298 ntBASIC16.62■□□□□ 0.25
GPC3P51654 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
GPC3P51654 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC3P51654 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC3P51654 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC3P51654 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC3P51654 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GPC3P51654 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.62■□□□□ 0.25
GPC3P51654 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.62■□□□□ 0.25
GPC3P51654 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.62■□□□□ 0.25
GPC3P51654 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
GPC3P51654 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.62■□□□□ 0.25
GPC3P51654 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GPC3P51654 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.61■□□□□ 0.25
GPC3P51654 KRT8P4-201ENST00000509735 1454 ntBASIC16.61■□□□□ 0.25
GPC3P51654 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
GPC3P51654 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.61■□□□□ 0.25
GPC3P51654 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
GPC3P51654 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.61■□□□□ 0.25
GPC3P51654 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
GPC3P51654 MIR663B-201ENST00000408361 115 ntBASIC16.61■□□□□ 0.25
GPC3P51654 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.61■□□□□ 0.25
GPC3P51654 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.61■□□□□ 0.25
GPC3P51654 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.61■□□□□ 0.25
GPC3P51654 HSPB1P2-201ENST00000448722 546 ntBASIC16.61■□□□□ 0.25
GPC3P51654 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.61■□□□□ 0.25
GPC3P51654 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.61■□□□□ 0.25
GPC3P51654 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.61■□□□□ 0.25
GPC3P51654 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.61■□□□□ 0.25
GPC3P51654 AC104982.3-201ENST00000581995 514 ntBASIC16.61■□□□□ 0.25
GPC3P51654 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.61■□□□□ 0.25
GPC3P51654 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
GPC3P51654 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC3P51654 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC3P51654 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GPC3P51654 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC3P51654 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GPC3P51654 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.6■□□□□ 0.25
GPC3P51654 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.6■□□□□ 0.25
GPC3P51654 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
GPC3P51654 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC3P51654 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC3P51654 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GPC3P51654 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC3P51654 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC3P51654 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
GPC3P51654 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC3P51654 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC3P51654 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC3P51654 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC3P51654 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms