Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12□□□□□ -0.49
CDC34P49427 AC142381.1-201ENST00000426099 345 ntBASIC12□□□□□ -0.49
CDC34P49427 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12□□□□□ -0.49
CDC34P49427 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
CDC34P49427 PENK-208ENST00000523051 772 ntTSL 5 BASIC12□□□□□ -0.49
CDC34P49427 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12□□□□□ -0.49
CDC34P49427 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12□□□□□ -0.49
CDC34P49427 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12□□□□□ -0.49
CDC34P49427 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12□□□□□ -0.49
CDC34P49427 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CDC34P49427 AC027307.2-201ENST00000591252 911 ntBASIC12□□□□□ -0.49
CDC34P49427 AC068137.2-201ENST00000605408 478 ntBASIC12□□□□□ -0.49
CDC34P49427 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CDC34P49427 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12□□□□□ -0.49
CDC34P49427 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12□□□□□ -0.49
CDC34P49427 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 KRT8P22-201ENST00000562317 1415 ntBASIC12□□□□□ -0.49
CDC34P49427 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12□□□□□ -0.49
CDC34P49427 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12□□□□□ -0.49
CDC34P49427 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
CDC34P49427 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC34P49427 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CDC34P49427 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.99□□□□□ -0.49
CDC34P49427 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.99□□□□□ -0.49
CDC34P49427 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.99□□□□□ -0.49
CDC34P49427 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
CDC34P49427 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CDC34P49427 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
CDC34P49427 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.99□□□□□ -0.49
CDC34P49427 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.99□□□□□ -0.49
CDC34P49427 AC009947.1-201ENST00000444350 727 ntBASIC11.99□□□□□ -0.49
CDC34P49427 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.99□□□□□ -0.49
CDC34P49427 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.99□□□□□ -0.49
CDC34P49427 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.99□□□□□ -0.49
CDC34P49427 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.99□□□□□ -0.49
CDC34P49427 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.99□□□□□ -0.49
CDC34P49427 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC11.99□□□□□ -0.49
CDC34P49427 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.99□□□□□ -0.49
CDC34P49427 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC11.99□□□□□ -0.49
CDC34P49427 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CDC34P49427 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.99□□□□□ -0.49
CDC34P49427 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 AC008267.7-201ENST00000624570 1194 ntBASIC11.99□□□□□ -0.49
CDC34P49427 FAM215A-202ENST00000632077 792 ntBASIC11.99□□□□□ -0.49
CDC34P49427 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.99□□□□□ -0.49
CDC34P49427 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CDC34P49427 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.99□□□□□ -0.49
CDC34P49427 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 PPT1-213ENST00000641319 2388 ntBASIC11.99□□□□□ -0.49
CDC34P49427 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.99□□□□□ -0.49
CDC34P49427 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CDC34P49427 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC34P49427 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CDC34P49427 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC34P49427 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
CDC34P49427 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms