Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.32□□□□□ -0.28
CX3CR1P49238 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.32□□□□□ -0.28
CX3CR1P49238 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.32□□□□□ -0.28
CX3CR1P49238 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.32□□□□□ -0.28
CX3CR1P49238 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CX3CR1P49238 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.32□□□□□ -0.28
CX3CR1P49238 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CX3CR1P49238 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.32□□□□□ -0.28
CX3CR1P49238 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CX3CR1P49238 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CX3CR1P49238 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.32□□□□□ -0.28
CX3CR1P49238 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CX3CR1P49238 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.32□□□□□ -0.28
CX3CR1P49238 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 GAPDHP40-201ENST00000505218 1006 ntBASIC13.32□□□□□ -0.28
CX3CR1P49238 DOC2GP-202ENST00000514950 1163 ntBASIC13.32□□□□□ -0.28
CX3CR1P49238 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.32□□□□□ -0.28
CX3CR1P49238 TPRX2P-201ENST00000535362 881 ntBASIC13.32□□□□□ -0.28
CX3CR1P49238 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.32□□□□□ -0.28
CX3CR1P49238 AL390955.2-201ENST00000603032 514 ntBASIC13.32□□□□□ -0.28
CX3CR1P49238 AC107373.2-201ENST00000607735 490 ntBASIC13.32□□□□□ -0.28
CX3CR1P49238 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.32□□□□□ -0.28
CX3CR1P49238 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.32□□□□□ -0.28
CX3CR1P49238 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.32□□□□□ -0.28
CX3CR1P49238 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.32□□□□□ -0.28
CX3CR1P49238 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.32□□□□□ -0.28
CX3CR1P49238 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CX3CR1P49238 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.32□□□□□ -0.28
CX3CR1P49238 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.32□□□□□ -0.28
CX3CR1P49238 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.32□□□□□ -0.28
CX3CR1P49238 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CX3CR1P49238 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CX3CR1P49238 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.32□□□□□ -0.28
CX3CR1P49238 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.32□□□□□ -0.28
CX3CR1P49238 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.32□□□□□ -0.28
CX3CR1P49238 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.32□□□□□ -0.28
CX3CR1P49238 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.32□□□□□ -0.28
CX3CR1P49238 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CX3CR1P49238 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
CX3CR1P49238 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CX3CR1P49238 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.31□□□□□ -0.28
CX3CR1P49238 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.31□□□□□ -0.28
CX3CR1P49238 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CR1P49238 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CR1P49238 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CR1P49238 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CR1P49238 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CX3CR1P49238 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.31□□□□□ -0.28
CX3CR1P49238 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CR1P49238 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CR1P49238 DRD5P1-201ENST00000456605 1438 ntBASIC13.31□□□□□ -0.28
CX3CR1P49238 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CR1P49238 AC015656.1-201ENST00000624209 3578 ntBASIC13.31□□□□□ -0.28
CX3CR1P49238 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CX3CR1P49238 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CR1P49238 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CR1P49238 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CR1P49238 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
CX3CR1P49238 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CR1P49238 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CX3CR1P49238 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.31□□□□□ -0.28
CX3CR1P49238 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CR1P49238 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.31□□□□□ -0.28
CX3CR1P49238 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.31□□□□□ -0.28
CX3CR1P49238 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CR1P49238 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.31□□□□□ -0.28
CX3CR1P49238 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.31□□□□□ -0.28
CX3CR1P49238 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.31□□□□□ -0.28
CX3CR1P49238 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CX3CR1P49238 AC023310.3-201ENST00000557027 670 ntBASIC13.31□□□□□ -0.28
CX3CR1P49238 AC100756.1-201ENST00000562736 682 ntBASIC13.31□□□□□ -0.28
CX3CR1P49238 AC138749.3-201ENST00000567691 622 ntBASIC13.31□□□□□ -0.28
CX3CR1P49238 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CX3CR1P49238 AC116165.1-201ENST00000611806 668 ntBASIC13.31□□□□□ -0.28
CX3CR1P49238 AC004790.1-201ENST00000612686 536 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms