Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.43□□□□□ -0.42
NKX2-1P43699 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX2-1P43699 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
NKX2-1P43699 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.42□□□□□ -0.42
NKX2-1P43699 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NKX2-1P43699 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
NKX2-1P43699 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NKX2-1P43699 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 CICP8-201ENST00000455800 2813 ntBASIC12.42□□□□□ -0.42
NKX2-1P43699 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.42□□□□□ -0.42
NKX2-1P43699 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.42□□□□□ -0.42
NKX2-1P43699 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
NKX2-1P43699 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NKX2-1P43699 MIR346-201ENST00000362234 95 ntBASIC12.42□□□□□ -0.42
NKX2-1P43699 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NKX2-1P43699 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.42□□□□□ -0.42
NKX2-1P43699 FDX1P1-201ENST00000449115 551 ntBASIC12.42□□□□□ -0.42
NKX2-1P43699 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.42□□□□□ -0.42
NKX2-1P43699 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.42□□□□□ -0.42
NKX2-1P43699 FAM86C2P-203ENST00000528684 1004 ntBASIC12.42□□□□□ -0.42
NKX2-1P43699 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.42□□□□□ -0.42
NKX2-1P43699 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.42□□□□□ -0.42
NKX2-1P43699 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
NKX2-1P43699 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.42□□□□□ -0.42
NKX2-1P43699 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.42□□□□□ -0.42
NKX2-1P43699 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.42□□□□□ -0.42
NKX2-1P43699 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.42□□□□□ -0.42
NKX2-1P43699 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 AC104109.2-201ENST00000602919 1418 ntBASIC12.42□□□□□ -0.42
NKX2-1P43699 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.42□□□□□ -0.42
NKX2-1P43699 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.42□□□□□ -0.42
NKX2-1P43699 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
NKX2-1P43699 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 TCAF1P1-201ENST00000414990 2232 ntBASIC12.42□□□□□ -0.42
NKX2-1P43699 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
NKX2-1P43699 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.42□□□□□ -0.42
NKX2-1P43699 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.42□□□□□ -0.42
NKX2-1P43699 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
NKX2-1P43699 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 ZNF259P1-201ENST00000407656 1365 ntBASIC12.42□□□□□ -0.42
NKX2-1P43699 LILRP1-201ENST00000444199 1370 ntBASIC12.42□□□□□ -0.42
NKX2-1P43699 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
NKX2-1P43699 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NKX2-1P43699 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.42□□□□□ -0.42
NKX2-1P43699 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NKX2-1P43699 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.42□□□□□ -0.42
NKX2-1P43699 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-1P43699 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
NKX2-1P43699 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-1P43699 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-1P43699 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.41□□□□□ -0.42
NKX2-1P43699 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-1P43699 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
NKX2-1P43699 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.41□□□□□ -0.42
NKX2-1P43699 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-1P43699 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
NKX2-1P43699 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
NKX2-1P43699 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-1P43699 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-1P43699 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-1P43699 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
NKX2-1P43699 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-1P43699 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-1P43699 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-1P43699 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-1P43699 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-1P43699 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-1P43699 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-1P43699 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NKX2-1P43699 AL133267.1-201ENST00000398220 340 ntBASIC12.41□□□□□ -0.42
NKX2-1P43699 AL355306.1-201ENST00000415580 579 ntBASIC12.41□□□□□ -0.42
NKX2-1P43699 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms