Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
APOBEC1P41238 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOBEC1P41238 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.65□□□□□ -0.22
APOBEC1P41238 COX5BP8-201ENST00000416911 349 ntBASIC13.65□□□□□ -0.22
APOBEC1P41238 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.65□□□□□ -0.22
APOBEC1P41238 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.65□□□□□ -0.22
APOBEC1P41238 KRT17P7-201ENST00000451704 1104 ntBASIC13.65□□□□□ -0.22
APOBEC1P41238 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.65□□□□□ -0.22
APOBEC1P41238 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.65□□□□□ -0.22
APOBEC1P41238 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
APOBEC1P41238 SLC25A47P1-201ENST00000531577 414 ntBASIC13.65□□□□□ -0.22
APOBEC1P41238 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOBEC1P41238 RN7SL48P-201ENST00000579283 293 ntBASIC13.65□□□□□ -0.22
APOBEC1P41238 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
APOBEC1P41238 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.65□□□□□ -0.22
APOBEC1P41238 LINC02084-201ENST00000606069 1096 ntBASIC13.65□□□□□ -0.22
APOBEC1P41238 AL022328.1-201ENST00000610050 478 ntBASIC13.65□□□□□ -0.22
APOBEC1P41238 AC132938.4-201ENST00000623835 848 ntBASIC13.65□□□□□ -0.22
APOBEC1P41238 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOBEC1P41238 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.65□□□□□ -0.22
APOBEC1P41238 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.65□□□□□ -0.22
APOBEC1P41238 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOBEC1P41238 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOBEC1P41238 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOBEC1P41238 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.65□□□□□ -0.22
APOBEC1P41238 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.65□□□□□ -0.22
APOBEC1P41238 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.65□□□□□ -0.22
APOBEC1P41238 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOBEC1P41238 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
APOBEC1P41238 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
APOBEC1P41238 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOBEC1P41238 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOBEC1P41238 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOBEC1P41238 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOBEC1P41238 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOBEC1P41238 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.65□□□□□ -0.22
APOBEC1P41238 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
APOBEC1P41238 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.65□□□□□ -0.23
APOBEC1P41238 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
APOBEC1P41238 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.64□□□□□ -0.23
APOBEC1P41238 CICP24-201ENST00000605464 2705 ntBASIC13.64□□□□□ -0.23
APOBEC1P41238 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.64□□□□□ -0.23
APOBEC1P41238 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.64□□□□□ -0.23
APOBEC1P41238 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.64□□□□□ -0.23
APOBEC1P41238 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.64□□□□□ -0.23
APOBEC1P41238 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.64□□□□□ -0.23
APOBEC1P41238 TLE1P1-201ENST00000422965 589 ntBASIC13.64□□□□□ -0.23
APOBEC1P41238 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.64□□□□□ -0.23
APOBEC1P41238 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.64□□□□□ -0.23
APOBEC1P41238 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.64□□□□□ -0.23
APOBEC1P41238 AC245100.3-201ENST00000441281 285 ntBASIC13.64□□□□□ -0.23
APOBEC1P41238 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
APOBEC1P41238 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 AC005225.4-201ENST00000557330 545 ntBASIC13.64□□□□□ -0.23
APOBEC1P41238 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.64□□□□□ -0.23
APOBEC1P41238 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.64□□□□□ -0.23
APOBEC1P41238 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
APOBEC1P41238 AC132938.2-201ENST00000579188 680 ntBASIC13.64□□□□□ -0.23
APOBEC1P41238 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.64□□□□□ -0.23
APOBEC1P41238 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.64□□□□□ -0.23
APOBEC1P41238 AC233724.13-201ENST00000598383 410 ntBASIC13.64□□□□□ -0.23
APOBEC1P41238 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.64□□□□□ -0.23
APOBEC1P41238 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.64□□□□□ -0.23
APOBEC1P41238 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.64□□□□□ -0.23
APOBEC1P41238 AL591163.1-201ENST00000641757 987 ntBASIC13.64□□□□□ -0.23
APOBEC1P41238 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 CICP14-201ENST00000629111 2732 ntBASIC13.64□□□□□ -0.23
APOBEC1P41238 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.64□□□□□ -0.23
APOBEC1P41238 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
APOBEC1P41238 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
APOBEC1P41238 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
APOBEC1P41238 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
APOBEC1P41238 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.64□□□□□ -0.23
APOBEC1P41238 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBEC1P41238 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms