Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.37□□□□□ -0.43
CEACAM3P40198 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CEACAM3P40198 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 PEG13-201ENST00000631594 5667 ntBASIC12.37□□□□□ -0.43
CEACAM3P40198 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.37□□□□□ -0.43
CEACAM3P40198 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.37□□□□□ -0.43
CEACAM3P40198 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.37□□□□□ -0.43
CEACAM3P40198 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.37□□□□□ -0.43
CEACAM3P40198 BAATP1-201ENST00000412284 1225 ntBASIC12.37□□□□□ -0.43
CEACAM3P40198 TTTY23B-201ENST00000442790 549 ntBASIC12.37□□□□□ -0.43
CEACAM3P40198 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.37□□□□□ -0.43
CEACAM3P40198 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CEACAM3P40198 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CEACAM3P40198 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.37□□□□□ -0.43
CEACAM3P40198 AC005252.2-201ENST00000624630 1141 ntBASIC12.37□□□□□ -0.43
CEACAM3P40198 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.37□□□□□ -0.43
CEACAM3P40198 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CEACAM3P40198 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CEACAM3P40198 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.37□□□□□ -0.43
CEACAM3P40198 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
CEACAM3P40198 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
CEACAM3P40198 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CEACAM3P40198 ZBED1P1-201ENST00000502364 1930 ntBASIC12.37□□□□□ -0.43
CEACAM3P40198 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CEACAM3P40198 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CEACAM3P40198 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CEACAM3P40198 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.36□□□□□ -0.43
CEACAM3P40198 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.36□□□□□ -0.43
CEACAM3P40198 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CEACAM3P40198 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CEACAM3P40198 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.36□□□□□ -0.43
CEACAM3P40198 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CEACAM3P40198 MIR193BHG-211ENST00000641433 5365 ntBASIC12.36□□□□□ -0.43
CEACAM3P40198 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CEACAM3P40198 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.36□□□□□ -0.43
CEACAM3P40198 ACTBP8-201ENST00000403258 1108 ntBASIC12.36□□□□□ -0.43
CEACAM3P40198 KLF2P2-201ENST00000416807 1039 ntBASIC12.36□□□□□ -0.43
CEACAM3P40198 KRT43P-201ENST00000434019 910 ntBASIC12.36□□□□□ -0.43
CEACAM3P40198 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.36□□□□□ -0.43
CEACAM3P40198 INE1-201ENST00000456273 945 ntBASIC12.36□□□□□ -0.43
CEACAM3P40198 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 AC022137.2-201ENST00000503482 481 ntBASIC12.36□□□□□ -0.43
CEACAM3P40198 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.36□□□□□ -0.43
CEACAM3P40198 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CEACAM3P40198 AP005018.1-201ENST00000525475 301 ntBASIC12.36□□□□□ -0.43
CEACAM3P40198 AC068587.3-201ENST00000526613 355 ntBASIC12.36□□□□□ -0.43
CEACAM3P40198 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.36□□□□□ -0.43
CEACAM3P40198 AC012645.4-201ENST00000610691 1061 ntBASIC12.36□□□□□ -0.43
CEACAM3P40198 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.36□□□□□ -0.43
CEACAM3P40198 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.36□□□□□ -0.43
CEACAM3P40198 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.36□□□□□ -0.43
CEACAM3P40198 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CEACAM3P40198 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.36□□□□□ -0.43
CEACAM3P40198 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.36□□□□□ -0.43
CEACAM3P40198 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
CEACAM3P40198 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CEACAM3P40198 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.36□□□□□ -0.43
CEACAM3P40198 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CEACAM3P40198 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms