Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCD3P28288 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ABCD3P28288 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCD3P28288 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ABCD3P28288 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCD3P28288 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCD3P28288 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCD3P28288 OR8S1-201ENST00000310194 1080 ntBASIC13.92□□□□□ -0.18
ABCD3P28288 TPM3P8-201ENST00000330554 643 ntBASIC13.92□□□□□ -0.18
ABCD3P28288 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.92□□□□□ -0.18
ABCD3P28288 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
ABCD3P28288 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.92□□□□□ -0.18
ABCD3P28288 CNN2P8-201ENST00000421872 913 ntBASIC13.92□□□□□ -0.18
ABCD3P28288 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.92□□□□□ -0.18
ABCD3P28288 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.92□□□□□ -0.18
ABCD3P28288 FAM197Y7-201ENST00000432892 766 ntBASIC13.92□□□□□ -0.18
ABCD3P28288 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.92□□□□□ -0.18
ABCD3P28288 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.92□□□□□ -0.18
ABCD3P28288 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.92□□□□□ -0.18
ABCD3P28288 RNA5SP486-201ENST00000515961 83 ntBASIC13.92□□□□□ -0.18
ABCD3P28288 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.92□□□□□ -0.18
ABCD3P28288 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.92□□□□□ -0.18
ABCD3P28288 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.92□□□□□ -0.18
ABCD3P28288 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.92□□□□□ -0.18
ABCD3P28288 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ABCD3P28288 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.92□□□□□ -0.18
ABCD3P28288 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
ABCD3P28288 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCD3P28288 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCD3P28288 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ABCD3P28288 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.92□□□□□ -0.18
ABCD3P28288 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.92□□□□□ -0.18
ABCD3P28288 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCD3P28288 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ABCD3P28288 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ABCD3P28288 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ABCD3P28288 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCD3P28288 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCD3P28288 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.92□□□□□ -0.18
ABCD3P28288 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ABCD3P28288 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ABCD3P28288 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCD3P28288 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCD3P28288 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ABCD3P28288 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.92□□□□□ -0.18
ABCD3P28288 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.92□□□□□ -0.18
ABCD3P28288 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.91□□□□□ -0.18
ABCD3P28288 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ABCD3P28288 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
ABCD3P28288 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
ABCD3P28288 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ABCD3P28288 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
ABCD3P28288 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.91□□□□□ -0.18
ABCD3P28288 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 GK-202ENST00000378941 458 ntTSL 3 BASIC13.91□□□□□ -0.18
ABCD3P28288 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.91□□□□□ -0.18
ABCD3P28288 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ABCD3P28288 MIR1909-201ENST00000411312 80 ntBASIC13.91□□□□□ -0.18
ABCD3P28288 POM121L8P-201ENST00000417732 1281 ntBASIC13.91□□□□□ -0.18
ABCD3P28288 ARSEP1-201ENST00000420443 635 ntBASIC13.91□□□□□ -0.18
ABCD3P28288 RPL7P3-201ENST00000441388 714 ntBASIC13.91□□□□□ -0.18
ABCD3P28288 POM121L9P-203ENST00000441984 1285 ntBASIC13.91□□□□□ -0.18
ABCD3P28288 KLF2P4-201ENST00000451959 1225 ntBASIC13.91□□□□□ -0.18
ABCD3P28288 CTBP2P5-201ENST00000454986 1264 ntBASIC13.91□□□□□ -0.18
ABCD3P28288 FO681548.1-201ENST00000455617 1132 ntBASIC13.91□□□□□ -0.18
ABCD3P28288 AL590640.2-201ENST00000457038 527 ntBASIC13.91□□□□□ -0.18
ABCD3P28288 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ABCD3P28288 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.91□□□□□ -0.18
ABCD3P28288 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.91□□□□□ -0.18
ABCD3P28288 AP000812.2-201ENST00000538934 718 ntBASIC13.91□□□□□ -0.18
ABCD3P28288 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.91□□□□□ -0.18
ABCD3P28288 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.91□□□□□ -0.18
ABCD3P28288 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.91□□□□□ -0.18
ABCD3P28288 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.91□□□□□ -0.18
ABCD3P28288 ECM1P1-201ENST00000604092 1279 ntBASIC13.91□□□□□ -0.18
ABCD3P28288 AC017083.2-201ENST00000608069 979 ntBASIC13.91□□□□□ -0.18
ABCD3P28288 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.91□□□□□ -0.18
ABCD3P28288 AC138951.2-201ENST00000623455 1161 ntBASIC13.91□□□□□ -0.18
ABCD3P28288 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ABCD3P28288 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.91□□□□□ -0.18
ABCD3P28288 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.91□□□□□ -0.18
ABCD3P28288 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
ABCD3P28288 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.91□□□□□ -0.18
ABCD3P28288 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms