Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
GDF1P27539 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.68□□□□□ -0.22
GDF1P27539 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.68□□□□□ -0.22
GDF1P27539 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.68□□□□□ -0.22
GDF1P27539 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.68□□□□□ -0.22
GDF1P27539 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
GDF1P27539 CNN2P10-201ENST00000443067 918 ntBASIC13.68□□□□□ -0.22
GDF1P27539 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
GDF1P27539 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.68□□□□□ -0.22
GDF1P27539 AL391280.1-201ENST00000506969 1062 ntBASIC13.68□□□□□ -0.22
GDF1P27539 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
GDF1P27539 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.68□□□□□ -0.22
GDF1P27539 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.68□□□□□ -0.22
GDF1P27539 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.68□□□□□ -0.22
GDF1P27539 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.68□□□□□ -0.22
GDF1P27539 AC004466.1-201ENST00000599515 1080 ntBASIC13.68□□□□□ -0.22
GDF1P27539 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.68□□□□□ -0.22
GDF1P27539 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 AC138466.3-201ENST00000619983 221 ntBASIC13.68□□□□□ -0.22
GDF1P27539 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
GDF1P27539 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.68□□□□□ -0.22
GDF1P27539 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.68□□□□□ -0.22
GDF1P27539 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.68□□□□□ -0.22
GDF1P27539 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
GDF1P27539 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.68□□□□□ -0.22
GDF1P27539 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.68□□□□□ -0.22
GDF1P27539 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.68□□□□□ -0.22
GDF1P27539 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
GDF1P27539 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
GDF1P27539 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.67□□□□□ -0.22
GDF1P27539 CLUHP2-201ENST00000426660 1303 ntBASIC13.67□□□□□ -0.22
GDF1P27539 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.67□□□□□ -0.22
GDF1P27539 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 MIR1908-201ENST00000410394 80 ntBASIC13.67□□□□□ -0.22
GDF1P27539 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.67□□□□□ -0.22
GDF1P27539 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 ACTBP11-201ENST00000436287 1126 ntBASIC13.67□□□□□ -0.22
GDF1P27539 PFN1P12-201ENST00000455938 534 ntBASIC13.67□□□□□ -0.22
GDF1P27539 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.67□□□□□ -0.22
GDF1P27539 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
GDF1P27539 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.67□□□□□ -0.22
GDF1P27539 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.67□□□□□ -0.22
GDF1P27539 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
GDF1P27539 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
GDF1P27539 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.67□□□□□ -0.22
GDF1P27539 RN7SL713P-201ENST00000582127 302 ntBASIC13.67□□□□□ -0.22
GDF1P27539 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.67□□□□□ -0.22
GDF1P27539 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.67□□□□□ -0.22
GDF1P27539 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.67□□□□□ -0.22
GDF1P27539 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
GDF1P27539 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.67□□□□□ -0.22
GDF1P27539 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
GDF1P27539 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GDF1P27539 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms