Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.21■□□□□ 0.35
PTPRAP18433 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPRAP18433 MIR3188-201ENST00000583494 85 ntBASIC17.21■□□□□ 0.35
PTPRAP18433 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.21■□□□□ 0.35
PTPRAP18433 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
PTPRAP18433 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPRAP18433 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTPRAP18433 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPRAP18433 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPRAP18433 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPRAP18433 AC018629.1-201ENST00000623381 1736 ntBASIC17.21■□□□□ 0.35
PTPRAP18433 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.21■□□□□ 0.35
PTPRAP18433 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPRAP18433 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PTPRAP18433 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PTPRAP18433 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PTPRAP18433 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPRAP18433 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 WASH3P-207ENST00000560956 1394 ntBASIC17.2■□□□□ 0.34
PTPRAP18433 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPRAP18433 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PTPRAP18433 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PTPRAP18433 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
PTPRAP18433 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPRAP18433 AP000356.3-201ENST00000382243 753 ntBASIC17.2■□□□□ 0.34
PTPRAP18433 KRT18P36-201ENST00000411618 1276 ntBASIC17.2■□□□□ 0.34
PTPRAP18433 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.2■□□□□ 0.34
PTPRAP18433 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.2■□□□□ 0.34
PTPRAP18433 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPRAP18433 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPRAP18433 AL592076.1-201ENST00000424448 303 ntBASIC17.2■□□□□ 0.34
PTPRAP18433 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.2■□□□□ 0.34
PTPRAP18433 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.2■□□□□ 0.34
PTPRAP18433 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.2■□□□□ 0.34
PTPRAP18433 PGAM1P5-201ENST00000548011 764 ntBASIC17.2■□□□□ 0.34
PTPRAP18433 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPRAP18433 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.2■□□□□ 0.34
PTPRAP18433 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPRAP18433 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PTPRAP18433 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.2■□□□□ 0.34
PTPRAP18433 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.2■□□□□ 0.34
PTPRAP18433 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPRAP18433 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPRAP18433 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PTPRAP18433 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPRAP18433 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPRAP18433 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPRAP18433 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
PTPRAP18433 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PTPRAP18433 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PTPRAP18433 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPRAP18433 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPRAP18433 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPRAP18433 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPRAP18433 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.19■□□□□ 0.34
PTPRAP18433 DOC2GP-204ENST00000639052 2548 ntBASIC17.19■□□□□ 0.34
PTPRAP18433 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPRAP18433 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.19■□□□□ 0.34
PTPRAP18433 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPRAP18433 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
PTPRAP18433 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTPRAP18433 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PTPRAP18433 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPRAP18433 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PTPRAP18433 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.19■□□□□ 0.34
PTPRAP18433 AP002803.1-201ENST00000528836 498 ntBASIC17.19■□□□□ 0.34
PTPRAP18433 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.19■□□□□ 0.34
PTPRAP18433 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PTPRAP18433 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPRAP18433 DNM1P30-201ENST00000563586 452 ntBASIC17.19■□□□□ 0.34
PTPRAP18433 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PTPRAP18433 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.19■□□□□ 0.34
PTPRAP18433 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.19■□□□□ 0.34
PTPRAP18433 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPRAP18433 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms