Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NCK1P16333 LINC01115-203ENST00000606068 577 ntBASIC14.32□□□□□ -0.12
NCK1P16333 C20orf181-201ENST00000623918 480 ntBASIC14.32□□□□□ -0.12
NCK1P16333 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.32□□□□□ -0.12
NCK1P16333 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.32□□□□□ -0.12
NCK1P16333 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.32□□□□□ -0.12
NCK1P16333 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NCK1P16333 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.32□□□□□ -0.12
NCK1P16333 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
NCK1P16333 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.32□□□□□ -0.12
NCK1P16333 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
NCK1P16333 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.32□□□□□ -0.12
NCK1P16333 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.32□□□□□ -0.12
NCK1P16333 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.32□□□□□ -0.12
NCK1P16333 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NCK1P16333 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.31□□□□□ -0.12
NCK1P16333 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NCK1P16333 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NCK1P16333 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NCK1P16333 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 CICP8-201ENST00000455800 2813 ntBASIC14.31□□□□□ -0.12
NCK1P16333 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
NCK1P16333 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NCK1P16333 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NCK1P16333 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NCK1P16333 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 AC015922.1-201ENST00000421102 1152 ntBASIC14.31□□□□□ -0.12
NCK1P16333 RBPMS2P1-201ENST00000437762 623 ntBASIC14.31□□□□□ -0.12
NCK1P16333 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.31□□□□□ -0.12
NCK1P16333 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NCK1P16333 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.31□□□□□ -0.12
NCK1P16333 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.31□□□□□ -0.12
NCK1P16333 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.31□□□□□ -0.12
NCK1P16333 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.31□□□□□ -0.12
NCK1P16333 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NCK1P16333 SAMD11P1-201ENST00000571429 661 ntBASIC14.31□□□□□ -0.12
NCK1P16333 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.31□□□□□ -0.12
NCK1P16333 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.31□□□□□ -0.12
NCK1P16333 AC025048.3-201ENST00000590609 569 ntBASIC14.31□□□□□ -0.12
NCK1P16333 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.31□□□□□ -0.12
NCK1P16333 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.31□□□□□ -0.12
NCK1P16333 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.31□□□□□ -0.12
NCK1P16333 AC007967.4-201ENST00000614700 386 ntBASIC14.31□□□□□ -0.12
NCK1P16333 AC005702.4-201ENST00000618393 416 ntBASIC14.31□□□□□ -0.12
NCK1P16333 MIR6069-201ENST00000620069 79 ntBASIC14.31□□□□□ -0.12
NCK1P16333 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.31□□□□□ -0.12
NCK1P16333 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.31□□□□□ -0.12
NCK1P16333 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.31□□□□□ -0.12
NCK1P16333 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NCK1P16333 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NCK1P16333 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.31□□□□□ -0.12
NCK1P16333 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NCK1P16333 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NCK1P16333 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.31□□□□□ -0.12
NCK1P16333 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NCK1P16333 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
NCK1P16333 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCK1P16333 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCK1P16333 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NCK1P16333 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms