Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC11.83□□□□□ -0.52
CD28P10747 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
CD28P10747 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.83□□□□□ -0.52
CD28P10747 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CD28P10747 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
CD28P10747 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC11.83□□□□□ -0.52
CD28P10747 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CD28P10747 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC11.83□□□□□ -0.52
CD28P10747 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC11.82□□□□□ -0.52
CD28P10747 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
CD28P10747 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 ANKRD30BP2-201ENST00000435744 1610 ntBASIC11.82□□□□□ -0.52
CD28P10747 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CD28P10747 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.82□□□□□ -0.52
CD28P10747 AC055811.4-201ENST00000624039 1754 ntBASIC11.82□□□□□ -0.52
CD28P10747 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC11.82□□□□□ -0.52
CD28P10747 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.82□□□□□ -0.52
CD28P10747 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CD28P10747 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC11.82□□□□□ -0.52
CD28P10747 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC11.82□□□□□ -0.52
CD28P10747 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC11.82□□□□□ -0.52
CD28P10747 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.82□□□□□ -0.52
CD28P10747 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC11.82□□□□□ -0.52
CD28P10747 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC11.82□□□□□ -0.52
CD28P10747 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
CD28P10747 PPY2P-201ENST00000582808 702 ntBASIC11.82□□□□□ -0.52
CD28P10747 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC11.82□□□□□ -0.52
CD28P10747 AC244452.3-201ENST00000636814 210 ntBASIC11.82□□□□□ -0.52
CD28P10747 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.82□□□□□ -0.52
CD28P10747 ANKRD26P3-201ENST00000454044 2748 ntBASIC11.82□□□□□ -0.52
CD28P10747 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CD28P10747 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC11.82□□□□□ -0.52
CD28P10747 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
CD28P10747 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CD28P10747 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CD28P10747 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CD28P10747 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11.82□□□□□ -0.52
CD28P10747 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CD28P10747 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CD28P10747 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CD28P10747 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC11.82□□□□□ -0.52
CD28P10747 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CD28P10747 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC11.81□□□□□ -0.52
CD28P10747 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.81□□□□□ -0.52
CD28P10747 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.81□□□□□ -0.52
CD28P10747 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC11.81□□□□□ -0.52
CD28P10747 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
CD28P10747 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CD28P10747 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CD28P10747 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.81□□□□□ -0.52
CD28P10747 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC11.81□□□□□ -0.52
CD28P10747 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CD28P10747 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CD28P10747 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
CD28P10747 RPL5P21-201ENST00000404620 815 ntBASIC11.81□□□□□ -0.52
CD28P10747 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
CD28P10747 TISP43-201ENST00000409793 538 ntTSL 4 BASIC11.81□□□□□ -0.52
CD28P10747 POM121L8P-201ENST00000417732 1281 ntBASIC11.81□□□□□ -0.52
CD28P10747 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC11.81□□□□□ -0.52
CD28P10747 PTPA-218ENST00000435132 618 ntTSL 2 BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms