Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HNRNPCL4P0DMR1 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HNRNPCL4P0DMR1 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HNRNPCL4P0DMR1 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.08□□□□□ -0.16
HNRNPCL4P0DMR1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 BX640514.1-201ENST00000583223 1918 ntBASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 BASP1P1-201ENST00000430708 665 ntBASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 VDAC1P7-201ENST00000462417 847 ntBASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 AC023310.3-201ENST00000557027 670 ntBASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 AC100756.1-201ENST00000562736 682 ntBASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 AC138749.3-201ENST00000567691 622 ntBASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 AC116165.1-201ENST00000611806 668 ntBASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 GRK6P1-201ENST00000400595 1711 ntBASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HNRNPCL4P0DMR1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 MRPS18AP1-201ENST00000414458 589 ntBASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 BRI3BPP1-201ENST00000594224 787 ntBASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 BX539320.1-201ENST00000623759 877 ntBASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 PRSS30P-206ENST00000641773 873 ntBASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 ST20-AS1-201ENST00000560255 4223 ntBASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HNRNPCL4P0DMR1 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms