Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC067750.1-201ENST00000608826 6545 ntBASIC13.78□□□□□ -0.2
P04436 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.78□□□□□ -0.2
P04436 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04436 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.78□□□□□ -0.2
P04436 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04436 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
P04436 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04436 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04436 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04436 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
P04436 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04436 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
P04436 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
P04436 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
P04436 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.77□□□□□ -0.2
P04436 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
P04436 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 FAM86MP-201ENST00000340703 885 ntBASIC13.77□□□□□ -0.21
P04436 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 BTBD6P1-201ENST00000412176 1267 ntBASIC13.77□□□□□ -0.21
P04436 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.77□□□□□ -0.21
P04436 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.77□□□□□ -0.21
P04436 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.77□□□□□ -0.21
P04436 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.77□□□□□ -0.21
P04436 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.77□□□□□ -0.21
P04436 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.77□□□□□ -0.21
P04436 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
P04436 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
P04436 AL391280.1-201ENST00000506969 1062 ntBASIC13.77□□□□□ -0.21
P04436 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.77□□□□□ -0.21
P04436 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.77□□□□□ -0.21
P04436 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.77□□□□□ -0.21
P04436 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.77□□□□□ -0.21
P04436 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.77□□□□□ -0.21
P04436 AP006547.1-201ENST00000563435 692 ntBASIC13.77□□□□□ -0.21
P04436 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.77□□□□□ -0.21
P04436 EEF1DP1-201ENST00000585891 896 ntBASIC13.77□□□□□ -0.21
P04436 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.77□□□□□ -0.21
P04436 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.77□□□□□ -0.21
P04436 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.77□□□□□ -0.21
P04436 AC004466.1-201ENST00000599515 1080 ntBASIC13.77□□□□□ -0.21
P04436 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.77□□□□□ -0.21
P04436 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.77□□□□□ -0.21
P04436 ZACNP1-201ENST00000612259 710 ntBASIC13.77□□□□□ -0.21
P04436 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.77□□□□□ -0.21
P04436 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.77□□□□□ -0.21
P04436 PPT1-215ENST00000641471 2368 ntBASIC13.77□□□□□ -0.21
P04436 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
P04436 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
P04436 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P04436 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04436 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.76□□□□□ -0.21
P04436 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04436 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P04436 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P04436 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
P04436 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
P04436 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04436 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04436 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.76□□□□□ -0.21
P04436 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
P04436 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.76□□□□□ -0.21
P04436 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.76□□□□□ -0.21
P04436 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04436 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.76□□□□□ -0.21
P04436 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
P04436 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04436 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04436 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04436 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04436 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04436 MIR1908-201ENST00000410394 80 ntBASIC13.76□□□□□ -0.21
P04436 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
P04436 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
P04436 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.76□□□□□ -0.21
P04436 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
P04436 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.76□□□□□ -0.21
P04436 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
P04436 AC106820.3-201ENST00000561653 397 ntBASIC13.76□□□□□ -0.21
P04436 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.76□□□□□ -0.21
P04436 PPY2P-201ENST00000582808 702 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms