Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-ND3P03897 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND3P03897 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND3P03897 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.47■□□□□ 0.07
MT-ND3P03897 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
MT-ND3P03897 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.47■□□□□ 0.07
MT-ND3P03897 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND3P03897 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
MT-ND3P03897 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND3P03897 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-ND3P03897 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-ND3P03897 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-ND3P03897 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-ND3P03897 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
MT-ND3P03897 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-ND3P03897 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
MT-ND3P03897 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
MT-ND3P03897 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
MT-ND3P03897 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 SPDYE17-201ENST00000412399 783 ntBASIC15.46■□□□□ 0.07
MT-ND3P03897 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.46■□□□□ 0.07
MT-ND3P03897 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-ND3P03897 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.46■□□□□ 0.07
MT-ND3P03897 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-ND3P03897 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-ND3P03897 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.46■□□□□ 0.07
MT-ND3P03897 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-ND3P03897 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.46■□□□□ 0.07
MT-ND3P03897 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-ND3P03897 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND3P03897 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
MT-ND3P03897 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.46■□□□□ 0.06
MT-ND3P03897 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
MT-ND3P03897 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
MT-ND3P03897 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
MT-ND3P03897 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
MT-ND3P03897 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
MT-ND3P03897 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
MT-ND3P03897 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
MT-ND3P03897 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
MT-ND3P03897 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
MT-ND3P03897 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.45■□□□□ 0.06
MT-ND3P03897 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.45■□□□□ 0.06
MT-ND3P03897 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.45■□□□□ 0.06
MT-ND3P03897 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.45■□□□□ 0.06
MT-ND3P03897 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.45■□□□□ 0.06
MT-ND3P03897 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 AC009477.1-201ENST00000452936 217 ntBASIC15.45■□□□□ 0.06
MT-ND3P03897 SERBP1P3-201ENST00000459980 809 ntBASIC15.45■□□□□ 0.06
MT-ND3P03897 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.45■□□□□ 0.06
MT-ND3P03897 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.45■□□□□ 0.06
MT-ND3P03897 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.45■□□□□ 0.06
MT-ND3P03897 AL079307.3-201ENST00000556114 283 ntBASIC15.45■□□□□ 0.06
MT-ND3P03897 AC015910.1-201ENST00000579400 975 ntBASIC15.45■□□□□ 0.06
MT-ND3P03897 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.45■□□□□ 0.06
MT-ND3P03897 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
MT-ND3P03897 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.45■□□□□ 0.06
MT-ND3P03897 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.45■□□□□ 0.06
MT-ND3P03897 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND3P03897 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
MT-ND3P03897 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms