Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.32□□□□□ -0.12
MT-ND1P03886 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.32□□□□□ -0.12
MT-ND1P03886 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.32□□□□□ -0.12
MT-ND1P03886 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.32□□□□□ -0.12
MT-ND1P03886 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.32□□□□□ -0.12
MT-ND1P03886 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
MT-ND1P03886 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
MT-ND1P03886 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MT-ND1P03886 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.31□□□□□ -0.12
MT-ND1P03886 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.31□□□□□ -0.12
MT-ND1P03886 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
MT-ND1P03886 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
MT-ND1P03886 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.31□□□□□ -0.12
MT-ND1P03886 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.31□□□□□ -0.12
MT-ND1P03886 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
MT-ND1P03886 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
MT-ND1P03886 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.31□□□□□ -0.12
MT-ND1P03886 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
MT-ND1P03886 SPDYE17-201ENST00000412399 783 ntBASIC14.31□□□□□ -0.12
MT-ND1P03886 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
MT-ND1P03886 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.31□□□□□ -0.12
MT-ND1P03886 GPS2P2-201ENST00000430745 888 ntBASIC14.31□□□□□ -0.12
MT-ND1P03886 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.31□□□□□ -0.12
MT-ND1P03886 KRT18P64-201ENST00000434946 1219 ntBASIC14.31□□□□□ -0.12
MT-ND1P03886 RBPMS2P1-201ENST00000437762 623 ntBASIC14.31□□□□□ -0.12
MT-ND1P03886 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.31□□□□□ -0.12
MT-ND1P03886 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.31□□□□□ -0.12
MT-ND1P03886 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.31□□□□□ -0.12
MT-ND1P03886 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.31□□□□□ -0.12
MT-ND1P03886 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.31□□□□□ -0.12
MT-ND1P03886 MIR3687-2-201ENST00000577708 61 ntBASIC14.31□□□□□ -0.12
MT-ND1P03886 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.31□□□□□ -0.12
MT-ND1P03886 AC003101.2-201ENST00000612557 442 ntBASIC14.31□□□□□ -0.12
MT-ND1P03886 MIR3687-1-201ENST00000614492 61 ntBASIC14.31□□□□□ -0.12
MT-ND1P03886 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.31□□□□□ -0.12
MT-ND1P03886 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.31□□□□□ -0.12
MT-ND1P03886 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
MT-ND1P03886 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
MT-ND1P03886 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
MT-ND1P03886 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
MT-ND1P03886 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MT-ND1P03886 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
MT-ND1P03886 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
MT-ND1P03886 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
MT-ND1P03886 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
MT-ND1P03886 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MT-ND1P03886 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
MT-ND1P03886 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
MT-ND1P03886 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MT-ND1P03886 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
MT-ND1P03886 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
MT-ND1P03886 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MT-ND1P03886 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MT-ND1P03886 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MT-ND1P03886 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
MT-ND1P03886 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MT-ND1P03886 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
MT-ND1P03886 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
MT-ND1P03886 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.3□□□□□ -0.12
MT-ND1P03886 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
MT-ND1P03886 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.3□□□□□ -0.12
MT-ND1P03886 AC074338.1-201ENST00000416825 156 ntBASIC14.3□□□□□ -0.12
MT-ND1P03886 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.3□□□□□ -0.12
MT-ND1P03886 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.3□□□□□ -0.12
MT-ND1P03886 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms