Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
MBD4O95243 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD4O95243 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.92■□□□□ 0.46
MBD4O95243 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.92■□□□□ 0.46
MBD4O95243 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
MBD4O95243 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.92■□□□□ 0.46
MBD4O95243 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.92■□□□□ 0.46
MBD4O95243 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
MBD4O95243 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.92■□□□□ 0.46
MBD4O95243 AL358472.3-201ENST00000608147 415 ntBASIC17.92■□□□□ 0.46
MBD4O95243 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.92■□□□□ 0.46
MBD4O95243 AC005695.3-201ENST00000614522 232 ntBASIC17.92■□□□□ 0.46
MBD4O95243 AP001002.3-201ENST00000623482 206 ntBASIC17.92■□□□□ 0.46
MBD4O95243 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.92■□□□□ 0.46
MBD4O95243 AC002472.3-201ENST00000640124 621 ntBASIC17.92■□□□□ 0.46
MBD4O95243 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD4O95243 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD4O95243 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.92■□□□□ 0.46
MBD4O95243 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
MBD4O95243 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.92■□□□□ 0.46
MBD4O95243 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD4O95243 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD4O95243 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD4O95243 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MBD4O95243 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.92■□□□□ 0.46
MBD4O95243 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.92■□□□□ 0.46
MBD4O95243 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD4O95243 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
MBD4O95243 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD4O95243 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MBD4O95243 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MBD4O95243 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MBD4O95243 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
MBD4O95243 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.91■□□□□ 0.46
MBD4O95243 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MBD4O95243 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.91■□□□□ 0.46
MBD4O95243 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.91■□□□□ 0.46
MBD4O95243 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.91■□□□□ 0.46
MBD4O95243 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD4O95243 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.91■□□□□ 0.46
MBD4O95243 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD4O95243 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.91■□□□□ 0.46
MBD4O95243 BTBD6P1-201ENST00000412176 1267 ntBASIC17.91■□□□□ 0.46
MBD4O95243 AC079178.1-201ENST00000420915 656 ntBASIC17.91■□□□□ 0.46
MBD4O95243 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MBD4O95243 TLE1P1-201ENST00000422965 589 ntBASIC17.91■□□□□ 0.46
MBD4O95243 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.91■□□□□ 0.46
MBD4O95243 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.91■□□□□ 0.46
MBD4O95243 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.91■□□□□ 0.46
MBD4O95243 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.91■□□□□ 0.46
MBD4O95243 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.91■□□□□ 0.46
MBD4O95243 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.91■□□□□ 0.46
MBD4O95243 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.91■□□□□ 0.46
MBD4O95243 AL096828.3-201ENST00000615354 462 ntBASIC17.91■□□□□ 0.46
MBD4O95243 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
MBD4O95243 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
MBD4O95243 TSPY26P-202ENST00000565928 3884 ntBASIC17.91■□□□□ 0.46
MBD4O95243 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
MBD4O95243 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MBD4O95243 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MBD4O95243 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
MBD4O95243 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
MBD4O95243 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD4O95243 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MBD4O95243 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
MBD4O95243 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
MBD4O95243 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.9■□□□□ 0.46
MBD4O95243 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 AC100850.1-201ENST00000506768 649 ntBASIC17.9■□□□□ 0.46
MBD4O95243 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.9■□□□□ 0.46
MBD4O95243 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.9■□□□□ 0.46
MBD4O95243 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
MBD4O95243 MIR6869-201ENST00000619434 62 ntBASIC17.9■□□□□ 0.46
MBD4O95243 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.9■□□□□ 0.46
MBD4O95243 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
MBD4O95243 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.9■□□□□ 0.46
MBD4O95243 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.9■□□□□ 0.46
MBD4O95243 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
MBD4O95243 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD4O95243 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms