Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL354702.1-201ENST00000442006 1960 ntBASIC13.89□□□□□ -0.19
NKX2-2O95096 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-2O95096 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-2O95096 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NKX2-2O95096 AL513477.1-201ENST00000602865 2407 ntBASIC13.89□□□□□ -0.19
NKX2-2O95096 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-2O95096 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-2O95096 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
NKX2-2O95096 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-2O95096 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.89□□□□□ -0.19
NKX2-2O95096 TTTY23B-201ENST00000442790 549 ntBASIC13.89□□□□□ -0.19
NKX2-2O95096 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-2O95096 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-2O95096 AC025279.2-201ENST00000569730 653 ntBASIC13.89□□□□□ -0.19
NKX2-2O95096 AC132938.2-201ENST00000579188 680 ntBASIC13.89□□□□□ -0.19
NKX2-2O95096 AC008735.3-201ENST00000596646 500 ntBASIC13.89□□□□□ -0.19
NKX2-2O95096 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NKX2-2O95096 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-2O95096 AC132938.4-201ENST00000623835 848 ntBASIC13.89□□□□□ -0.19
NKX2-2O95096 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX2-2O95096 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.89□□□□□ -0.19
NKX2-2O95096 AL591163.1-201ENST00000641757 987 ntBASIC13.89□□□□□ -0.19
NKX2-2O95096 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-2O95096 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX2-2O95096 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.89□□□□□ -0.19
NKX2-2O95096 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-2O95096 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-2O95096 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NKX2-2O95096 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-2O95096 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.89□□□□□ -0.19
NKX2-2O95096 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-2O95096 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NKX2-2O95096 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-2O95096 CLUHP2-201ENST00000426660 1303 ntBASIC13.89□□□□□ -0.19
NKX2-2O95096 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NKX2-2O95096 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
NKX2-2O95096 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-2O95096 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NKX2-2O95096 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX2-2O95096 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-2O95096 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-2O95096 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NKX2-2O95096 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-2O95096 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NKX2-2O95096 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NKX2-2O95096 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NKX2-2O95096 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX2-2O95096 AC005912.2-201ENST00000619492 2400 ntBASIC13.88□□□□□ -0.19
NKX2-2O95096 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 RN7SKP230-201ENST00000365642 335 ntBASIC13.88□□□□□ -0.19
NKX2-2O95096 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX2-2O95096 AC092933.1-201ENST00000393644 945 ntBASIC13.88□□□□□ -0.19
NKX2-2O95096 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.88□□□□□ -0.19
NKX2-2O95096 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-2O95096 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-2O95096 TPT1P11-201ENST00000458482 498 ntBASIC13.88□□□□□ -0.19
NKX2-2O95096 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.88□□□□□ -0.19
NKX2-2O95096 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX2-2O95096 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.88□□□□□ -0.19
NKX2-2O95096 AC233724.13-201ENST00000598383 410 ntBASIC13.88□□□□□ -0.19
NKX2-2O95096 AC138466.3-201ENST00000619983 221 ntBASIC13.88□□□□□ -0.19
NKX2-2O95096 IGHV3-72-202ENST00000621503 303 ntBASIC13.88□□□□□ -0.19
NKX2-2O95096 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX2-2O95096 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX2-2O95096 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX2-2O95096 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX2-2O95096 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.88□□□□□ -0.19
NKX2-2O95096 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NKX2-2O95096 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
NKX2-2O95096 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-2O95096 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-2O95096 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-2O95096 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.88□□□□□ -0.19
NKX2-2O95096 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NKX2-2O95096 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.87□□□□□ -0.19
NKX2-2O95096 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.87□□□□□ -0.19
NKX2-2O95096 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NKX2-2O95096 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms