Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
BEST1O76090 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 ACTBP11-201ENST00000436287 1126 ntBASIC15.76■□□□□ 0.11
BEST1O76090 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.76■□□□□ 0.11
BEST1O76090 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.76■□□□□ 0.11
BEST1O76090 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 AC092658.1-201ENST00000505836 891 ntBASIC15.76■□□□□ 0.11
BEST1O76090 AC100850.1-201ENST00000506768 649 ntBASIC15.76■□□□□ 0.11
BEST1O76090 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.76■□□□□ 0.11
BEST1O76090 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.76■□□□□ 0.11
BEST1O76090 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.76■□□□□ 0.11
BEST1O76090 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
BEST1O76090 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.76■□□□□ 0.11
BEST1O76090 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.76■□□□□ 0.11
BEST1O76090 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.76■□□□□ 0.11
BEST1O76090 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.76■□□□□ 0.11
BEST1O76090 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.76■□□□□ 0.11
BEST1O76090 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.76■□□□□ 0.11
BEST1O76090 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
BEST1O76090 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.76■□□□□ 0.11
BEST1O76090 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
BEST1O76090 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.76■□□□□ 0.11
BEST1O76090 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
BEST1O76090 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
BEST1O76090 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.75■□□□□ 0.11
BEST1O76090 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.75■□□□□ 0.11
BEST1O76090 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.75■□□□□ 0.11
BEST1O76090 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.75■□□□□ 0.11
BEST1O76090 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.75■□□□□ 0.11
BEST1O76090 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
BEST1O76090 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
BEST1O76090 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
BEST1O76090 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
BEST1O76090 AL136309.1-201ENST00000403917 691 ntBASIC15.75■□□□□ 0.11
BEST1O76090 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.75■□□□□ 0.11
BEST1O76090 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 AC108725.1-201ENST00000495472 409 ntBASIC15.75■□□□□ 0.11
BEST1O76090 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
BEST1O76090 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.75■□□□□ 0.11
BEST1O76090 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.75■□□□□ 0.11
BEST1O76090 EEF1DP1-201ENST00000585891 896 ntBASIC15.75■□□□□ 0.11
BEST1O76090 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.75■□□□□ 0.11
BEST1O76090 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
BEST1O76090 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.75■□□□□ 0.11
BEST1O76090 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
BEST1O76090 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 FGD5P1-202ENST00000614866 2498 ntBASIC15.75■□□□□ 0.11
BEST1O76090 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
BEST1O76090 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
BEST1O76090 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
BEST1O76090 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.74■□□□□ 0.11
BEST1O76090 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST1O76090 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST1O76090 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
BEST1O76090 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 AC007292.2-201ENST00000593524 1812 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms