Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLPXO76031 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
CLPXO76031 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CLPXO76031 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.81□□□□□ -0.2
CLPXO76031 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CLPXO76031 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.81□□□□□ -0.2
CLPXO76031 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.81□□□□□ -0.2
CLPXO76031 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CLPXO76031 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLPXO76031 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLPXO76031 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.8□□□□□ -0.2
CLPXO76031 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CLPXO76031 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CLPXO76031 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 AC012569.1-201ENST00000591191 1524 ntBASIC13.8□□□□□ -0.2
CLPXO76031 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.8□□□□□ -0.2
CLPXO76031 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CLPXO76031 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
CLPXO76031 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLPXO76031 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLPXO76031 AC023274.1-201ENST00000418278 595 ntBASIC13.8□□□□□ -0.2
CLPXO76031 MCCD1P2-201ENST00000423228 335 ntBASIC13.8□□□□□ -0.2
CLPXO76031 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.8□□□□□ -0.2
CLPXO76031 AL513480.1-201ENST00000451731 511 ntBASIC13.8□□□□□ -0.2
CLPXO76031 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLPXO76031 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CLPXO76031 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.8□□□□□ -0.2
CLPXO76031 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.8□□□□□ -0.2
CLPXO76031 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.8□□□□□ -0.2
CLPXO76031 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.8□□□□□ -0.2
CLPXO76031 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLPXO76031 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.8□□□□□ -0.2
CLPXO76031 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.8□□□□□ -0.2
CLPXO76031 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.8□□□□□ -0.2
CLPXO76031 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.8□□□□□ -0.2
CLPXO76031 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.8□□□□□ -0.2
CLPXO76031 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.8□□□□□ -0.2
CLPXO76031 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.8□□□□□ -0.2
CLPXO76031 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 KRT8P22-201ENST00000562317 1415 ntBASIC13.8□□□□□ -0.2
CLPXO76031 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLPXO76031 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.79□□□□□ -0.2
CLPXO76031 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLPXO76031 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLPXO76031 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.79□□□□□ -0.2
CLPXO76031 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLPXO76031 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLPXO76031 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLPXO76031 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.79□□□□□ -0.2
CLPXO76031 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLPXO76031 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLPXO76031 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLPXO76031 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CLPXO76031 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.79□□□□□ -0.2
CLPXO76031 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CLPXO76031 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.79□□□□□ -0.2
CLPXO76031 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.79□□□□□ -0.2
CLPXO76031 AC211486.1-202ENST00000416371 468 ntBASIC13.79□□□□□ -0.2
CLPXO76031 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CLPXO76031 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLPXO76031 AP006288.1-201ENST00000446065 395 ntBASIC13.79□□□□□ -0.2
CLPXO76031 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CLPXO76031 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.79□□□□□ -0.2
CLPXO76031 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.79□□□□□ -0.2
CLPXO76031 AC211476.1-201ENST00000503899 468 ntBASIC13.79□□□□□ -0.2
CLPXO76031 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLPXO76031 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.79□□□□□ -0.2
CLPXO76031 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.79□□□□□ -0.2
CLPXO76031 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.79□□□□□ -0.2
CLPXO76031 AC096734.2-201ENST00000562054 433 ntBASIC13.79□□□□□ -0.2
CLPXO76031 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLPXO76031 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.79□□□□□ -0.2
CLPXO76031 AL355385.1-201ENST00000606123 409 ntBASIC13.79□□□□□ -0.2
CLPXO76031 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLPXO76031 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLPXO76031 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLPXO76031 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.79□□□□□ -0.2
CLPXO76031 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CLPXO76031 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLPXO76031 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLPXO76031 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLPXO76031 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLPXO76031 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLPXO76031 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms