Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP2AO43633 ZBED1P1-201ENST00000502364 1930 ntBASIC16.98■□□□□ 0.31
CHMP2AO43633 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
CHMP2AO43633 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CHMP2AO43633 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP2AO43633 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP2AO43633 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP2AO43633 CLUHP2-201ENST00000426660 1303 ntBASIC16.97■□□□□ 0.31
CHMP2AO43633 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP2AO43633 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP2AO43633 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.97■□□□□ 0.31
CHMP2AO43633 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHMP2AO43633 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP2AO43633 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHMP2AO43633 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHMP2AO43633 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP2AO43633 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CHMP2AO43633 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.97■□□□□ 0.31
CHMP2AO43633 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP2AO43633 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP2AO43633 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CHMP2AO43633 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP2AO43633 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHMP2AO43633 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.97■□□□□ 0.31
CHMP2AO43633 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.97■□□□□ 0.31
CHMP2AO43633 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CHMP2AO43633 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CHMP2AO43633 FAM21FP-201ENST00000426241 1131 ntBASIC16.97■□□□□ 0.31
CHMP2AO43633 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP2AO43633 YBX1P6-201ENST00000442962 1002 ntBASIC16.97■□□□□ 0.31
CHMP2AO43633 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.97■□□□□ 0.31
CHMP2AO43633 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CHMP2AO43633 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.97■□□□□ 0.31
CHMP2AO43633 AC079316.1-201ENST00000548397 411 ntBASIC16.97■□□□□ 0.31
CHMP2AO43633 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.97■□□□□ 0.31
CHMP2AO43633 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.97■□□□□ 0.31
CHMP2AO43633 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.97■□□□□ 0.31
CHMP2AO43633 OR10B1P-201ENST00000601666 907 ntBASIC16.97■□□□□ 0.31
CHMP2AO43633 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.97■□□□□ 0.31
CHMP2AO43633 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHMP2AO43633 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CHMP2AO43633 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.97■□□□□ 0.31
CHMP2AO43633 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CHMP2AO43633 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP2AO43633 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP2AO43633 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP2AO43633 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP2AO43633 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP2AO43633 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP2AO43633 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CHMP2AO43633 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP2AO43633 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP2AO43633 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CHMP2AO43633 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.97■□□□□ 0.31
CHMP2AO43633 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CHMP2AO43633 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP2AO43633 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.96■□□□□ 0.31
CHMP2AO43633 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CHMP2AO43633 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.96■□□□□ 0.31
CHMP2AO43633 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP2AO43633 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.96■□□□□ 0.31
CHMP2AO43633 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP2AO43633 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CHMP2AO43633 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CHMP2AO43633 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.96■□□□□ 0.31
CHMP2AO43633 AC023090.2-201ENST00000625182 2110 ntBASIC16.96■□□□□ 0.31
CHMP2AO43633 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CHMP2AO43633 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.96■□□□□ 0.31
CHMP2AO43633 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP2AO43633 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP2AO43633 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP2AO43633 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.96■□□□□ 0.31
CHMP2AO43633 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP2AO43633 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.96■□□□□ 0.31
CHMP2AO43633 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.96■□□□□ 0.31
CHMP2AO43633 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.96■□□□□ 0.31
CHMP2AO43633 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.96■□□□□ 0.31
CHMP2AO43633 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.96■□□□□ 0.31
CHMP2AO43633 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CHMP2AO43633 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.96■□□□□ 0.31
CHMP2AO43633 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.96■□□□□ 0.31
CHMP2AO43633 AL603764.1-201ENST00000636452 321 ntBASIC16.96■□□□□ 0.31
CHMP2AO43633 AC008687.7-202ENST00000637404 953 ntBASIC16.96■□□□□ 0.31
CHMP2AO43633 AL033527.4-201ENST00000641026 673 ntBASIC16.96■□□□□ 0.31
CHMP2AO43633 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP2AO43633 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.96■□□□□ 0.31
CHMP2AO43633 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP2AO43633 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.96■□□□□ 0.31
CHMP2AO43633 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP2AO43633 AC007326.2-201ENST00000624224 7579 ntBASIC16.96■□□□□ 0.31
CHMP2AO43633 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CHMP2AO43633 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHMP2AO43633 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CHMP2AO43633 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 MYO15B-237ENST00000642007 4893 ntBASIC16.95■□□□□ 0.3
CHMP2AO43633 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms