Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.18□□□□□ -0.3
XRCC2O43543 PTENP1-202ENST00000532280 3996 ntBASIC13.18□□□□□ -0.3
XRCC2O43543 AC007191.1-201ENST00000623179 2995 ntBASIC13.18□□□□□ -0.3
XRCC2O43543 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.18□□□□□ -0.3
XRCC2O43543 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
XRCC2O43543 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
XRCC2O43543 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
XRCC2O43543 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
XRCC2O43543 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
XRCC2O43543 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
XRCC2O43543 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
XRCC2O43543 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
XRCC2O43543 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.18□□□□□ -0.3
XRCC2O43543 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 C1QBPP1-201ENST00000400117 770 ntBASIC13.18□□□□□ -0.3
XRCC2O43543 SOCS2P1-201ENST00000417727 557 ntBASIC13.18□□□□□ -0.3
XRCC2O43543 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.18□□□□□ -0.3
XRCC2O43543 SPTLC1P1-201ENST00000447199 261 ntBASIC13.18□□□□□ -0.3
XRCC2O43543 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.18□□□□□ -0.3
XRCC2O43543 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.18□□□□□ -0.3
XRCC2O43543 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.18□□□□□ -0.3
XRCC2O43543 AC027796.2-201ENST00000575326 344 ntBASIC13.18□□□□□ -0.3
XRCC2O43543 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.18□□□□□ -0.3
XRCC2O43543 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.18□□□□□ -0.3
XRCC2O43543 AC004233.3-201ENST00000607794 1269 ntBASIC13.18□□□□□ -0.3
XRCC2O43543 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.18□□□□□ -0.3
XRCC2O43543 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.18□□□□□ -0.3
XRCC2O43543 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
XRCC2O43543 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.18□□□□□ -0.3
XRCC2O43543 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.18□□□□□ -0.3
XRCC2O43543 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.18□□□□□ -0.3
XRCC2O43543 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
XRCC2O43543 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
XRCC2O43543 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.18□□□□□ -0.3
XRCC2O43543 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
XRCC2O43543 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.18□□□□□ -0.3
XRCC2O43543 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
XRCC2O43543 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
XRCC2O43543 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.17□□□□□ -0.3
XRCC2O43543 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.17□□□□□ -0.3
XRCC2O43543 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
XRCC2O43543 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.17□□□□□ -0.3
XRCC2O43543 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
XRCC2O43543 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
XRCC2O43543 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.17□□□□□ -0.3
XRCC2O43543 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.17□□□□□ -0.3
XRCC2O43543 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.17□□□□□ -0.3
XRCC2O43543 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.17□□□□□ -0.3
XRCC2O43543 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.17□□□□□ -0.3
XRCC2O43543 AC123567.1-201ENST00000548294 1261 ntBASIC13.17□□□□□ -0.3
XRCC2O43543 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.17□□□□□ -0.3
XRCC2O43543 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.17□□□□□ -0.3
XRCC2O43543 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.17□□□□□ -0.3
XRCC2O43543 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.17□□□□□ -0.3
XRCC2O43543 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.17□□□□□ -0.3
XRCC2O43543 AL132655.2-201ENST00000596276 594 ntBASIC13.17□□□□□ -0.3
XRCC2O43543 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.17□□□□□ -0.3
XRCC2O43543 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.17□□□□□ -0.3
XRCC2O43543 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
XRCC2O43543 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.17□□□□□ -0.3
XRCC2O43543 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
XRCC2O43543 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
XRCC2O43543 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms