Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.45□□□□□ -0.1
CLOCKO15516 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CLOCKO15516 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CLOCKO15516 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLOCKO15516 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.45□□□□□ -0.1
CLOCKO15516 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLOCKO15516 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.45□□□□□ -0.1
CLOCKO15516 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CLOCKO15516 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLOCKO15516 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLOCKO15516 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
CLOCKO15516 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CLOCKO15516 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CLOCKO15516 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.44□□□□□ -0.1
CLOCKO15516 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.44□□□□□ -0.1
CLOCKO15516 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.44□□□□□ -0.1
CLOCKO15516 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.44□□□□□ -0.1
CLOCKO15516 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.44□□□□□ -0.1
CLOCKO15516 FAM58DP-201ENST00000428076 619 ntBASIC14.44□□□□□ -0.1
CLOCKO15516 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.44□□□□□ -0.1
CLOCKO15516 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.44□□□□□ -0.1
CLOCKO15516 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.44□□□□□ -0.1
CLOCKO15516 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.44□□□□□ -0.1
CLOCKO15516 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.44□□□□□ -0.1
CLOCKO15516 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CLOCKO15516 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.44□□□□□ -0.1
CLOCKO15516 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLOCKO15516 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLOCKO15516 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLOCKO15516 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.44□□□□□ -0.1
CLOCKO15516 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.44□□□□□ -0.1
CLOCKO15516 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLOCKO15516 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CLOCKO15516 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.44□□□□□ -0.1
CLOCKO15516 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLOCKO15516 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CLOCKO15516 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.43□□□□□ -0.1
CLOCKO15516 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.43□□□□□ -0.1
CLOCKO15516 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CLOCKO15516 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.43□□□□□ -0.1
CLOCKO15516 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.43□□□□□ -0.1
CLOCKO15516 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CLOCKO15516 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLOCKO15516 FAM220BP-201ENST00000377689 816 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms