Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CES1P2-201ENST00000566467 1242 ntBASIC23.4■■□□□ 1.34
CHD1O14646 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC23.4■■□□□ 1.34
CHD1O14646 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC23.4■■□□□ 1.34
CHD1O14646 AC091769.1-201ENST00000619576 568 ntBASIC23.4■■□□□ 1.34
CHD1O14646 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD1O14646 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
CHD1O14646 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
CHD1O14646 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC23.4■■□□□ 1.34
CHD1O14646 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD1O14646 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CHD1O14646 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC23.4■■□□□ 1.34
CHD1O14646 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CHD1O14646 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD1O14646 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CHD1O14646 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CHD1O14646 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
CHD1O14646 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CHD1O14646 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CHD1O14646 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.34
CHD1O14646 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
CHD1O14646 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC23.39■■□□□ 1.34
CHD1O14646 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC23.39■■□□□ 1.34
CHD1O14646 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC23.39■■□□□ 1.34
CHD1O14646 HPX-213ENST00000615166 826 ntTSL 5 BASIC23.39■■□□□ 1.34
CHD1O14646 NF1P11-201ENST00000621292 1282 ntBASIC23.39■■□□□ 1.34
CHD1O14646 CA12-203ENST00000422263 2556 ntTSL 2 BASIC23.39■■□□□ 1.34
CHD1O14646 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CHD1O14646 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CHD1O14646 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHD1O14646 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
CHD1O14646 SIRPB3P-201ENST00000340424 1216 ntBASIC23.39■■□□□ 1.33
CHD1O14646 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC23.39■■□□□ 1.33
CHD1O14646 AC025594.1-201ENST00000469533 543 ntBASIC23.39■■□□□ 1.33
CHD1O14646 EEF1GP8-201ENST00000506566 1154 ntBASIC23.39■■□□□ 1.33
CHD1O14646 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC23.39■■□□□ 1.33
CHD1O14646 AC145285.5-201ENST00000562217 361 ntBASIC23.39■■□□□ 1.33
CHD1O14646 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC23.39■■□□□ 1.33
CHD1O14646 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC23.39■■□□□ 1.33
CHD1O14646 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHD1O14646 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHD1O14646 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CHD1O14646 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC23.39■■□□□ 1.33
CHD1O14646 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC23.38■■□□□ 1.33
CHD1O14646 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC23.38■■□□□ 1.33
CHD1O14646 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC23.38■■□□□ 1.33
CHD1O14646 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC23.38■■□□□ 1.33
CHD1O14646 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC23.38■■□□□ 1.33
CHD1O14646 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
CHD1O14646 RHOC-205ENST00000369636 786 ntTSL 2 BASIC23.38■■□□□ 1.33
CHD1O14646 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC23.38■■□□□ 1.33
CHD1O14646 OR7E115P-201ENST00000382617 1024 ntBASIC23.38■■□□□ 1.33
CHD1O14646 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC23.38■■□□□ 1.33
CHD1O14646 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC23.38■■□□□ 1.33
CHD1O14646 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 AL359091.4-201ENST00000610052 409 ntBASIC23.38■■□□□ 1.33
CHD1O14646 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC23.38■■□□□ 1.33
CHD1O14646 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC23.38■■□□□ 1.33
CHD1O14646 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
CHD1O14646 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CHD1O14646 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC23.38■■□□□ 1.33
CHD1O14646 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
CHD1O14646 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD1O14646 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD1O14646 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD1O14646 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CHD1O14646 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC23.37■■□□□ 1.33
CHD1O14646 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CHD1O14646 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC23.37■■□□□ 1.33
CHD1O14646 U73169.1-201ENST00000395152 367 ntBASIC23.37■■□□□ 1.33
CHD1O14646 AC073210.1-201ENST00000414799 232 ntBASIC23.37■■□□□ 1.33
CHD1O14646 FAM21EP-201ENST00000417804 985 ntBASIC23.37■■□□□ 1.33
CHD1O14646 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CHD1O14646 TPT1P6-201ENST00000458298 514 ntBASIC23.37■■□□□ 1.33
CHD1O14646 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC23.37■■□□□ 1.33
CHD1O14646 AC011431.1-201ENST00000512971 230 ntBASIC23.37■■□□□ 1.33
CHD1O14646 AC004923.3-201ENST00000527532 355 ntBASIC23.37■■□□□ 1.33
CHD1O14646 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CHD1O14646 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CHD1O14646 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
CHD1O14646 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CHD1O14646 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms