Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.75□□□□□ -0.05
E2F3O00716 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
E2F3O00716 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.75□□□□□ -0.05
E2F3O00716 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.75□□□□□ -0.05
E2F3O00716 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
E2F3O00716 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
E2F3O00716 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.75□□□□□ -0.05
E2F3O00716 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
E2F3O00716 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
E2F3O00716 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
E2F3O00716 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.74□□□□□ -0.05
E2F3O00716 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
E2F3O00716 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.74□□□□□ -0.05
E2F3O00716 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
E2F3O00716 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
E2F3O00716 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.74□□□□□ -0.05
E2F3O00716 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.74□□□□□ -0.05
E2F3O00716 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
E2F3O00716 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.74□□□□□ -0.05
E2F3O00716 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
E2F3O00716 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.74□□□□□ -0.05
E2F3O00716 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
E2F3O00716 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
E2F3O00716 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.74□□□□□ -0.05
E2F3O00716 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
E2F3O00716 ACA64.2-201ENST00000459014 129 ntBASIC14.74□□□□□ -0.05
E2F3O00716 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.74□□□□□ -0.05
E2F3O00716 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.74□□□□□ -0.05
E2F3O00716 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.74□□□□□ -0.05
E2F3O00716 AC132938.2-201ENST00000579188 680 ntBASIC14.74□□□□□ -0.05
E2F3O00716 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.74□□□□□ -0.05
E2F3O00716 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.74□□□□□ -0.05
E2F3O00716 AC099568.2-201ENST00000609194 695 ntBASIC14.74□□□□□ -0.05
E2F3O00716 MIR8072-201ENST00000614241 80 ntBASIC14.74□□□□□ -0.05
E2F3O00716 AL162274.1-201ENST00000617191 1098 ntBASIC14.74□□□□□ -0.05
E2F3O00716 AL591163.1-201ENST00000641757 987 ntBASIC14.74□□□□□ -0.05
E2F3O00716 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.74□□□□□ -0.05
E2F3O00716 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
E2F3O00716 INTS4P2-202ENST00000614726 2019 ntBASIC14.74□□□□□ -0.05
E2F3O00716 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
E2F3O00716 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
E2F3O00716 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
E2F3O00716 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
E2F3O00716 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.74□□□□□ -0.05
E2F3O00716 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.74□□□□□ -0.05
E2F3O00716 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.74□□□□□ -0.05
E2F3O00716 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
E2F3O00716 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
E2F3O00716 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.73□□□□□ -0.05
E2F3O00716 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
E2F3O00716 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.73□□□□□ -0.05
E2F3O00716 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
E2F3O00716 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.73□□□□□ -0.05
E2F3O00716 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
E2F3O00716 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
E2F3O00716 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
E2F3O00716 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.73□□□□□ -0.05
E2F3O00716 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
E2F3O00716 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.73□□□□□ -0.05
E2F3O00716 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
E2F3O00716 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
E2F3O00716 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
E2F3O00716 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
E2F3O00716 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
E2F3O00716 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.73□□□□□ -0.05
E2F3O00716 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.73□□□□□ -0.05
E2F3O00716 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
E2F3O00716 MIR1909-201ENST00000411312 80 ntBASIC14.73□□□□□ -0.05
E2F3O00716 NUS1P3-201ENST00000423502 862 ntBASIC14.73□□□□□ -0.05
E2F3O00716 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.73□□□□□ -0.05
E2F3O00716 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.73□□□□□ -0.05
E2F3O00716 AC022494.1-201ENST00000466044 728 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms