Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
O00370 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
O00370 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.11■□□□□ 0.17
O00370 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
O00370 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.11■□□□□ 0.17
O00370 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.11■□□□□ 0.17
O00370 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.11■□□□□ 0.17
O00370 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
O00370 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
O00370 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
O00370 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
O00370 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.1■□□□□ 0.17
O00370 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.1■□□□□ 0.17
O00370 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.1■□□□□ 0.17
O00370 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
O00370 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
O00370 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.1■□□□□ 0.17
O00370 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
O00370 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.1■□□□□ 0.17
O00370 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
O00370 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.1■□□□□ 0.17
O00370 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 AC106760.1-201ENST00000508690 800 ntBASIC16.1■□□□□ 0.17
O00370 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.1■□□□□ 0.17
O00370 SLC25A47P1-201ENST00000531577 414 ntBASIC16.1■□□□□ 0.17
O00370 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.1■□□□□ 0.17
O00370 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.1■□□□□ 0.17
O00370 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.1■□□□□ 0.17
O00370 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
O00370 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.1■□□□□ 0.17
O00370 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.1■□□□□ 0.17
O00370 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
O00370 AC005912.2-201ENST00000619492 2400 ntBASIC16.1■□□□□ 0.17
O00370 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
O00370 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.1■□□□□ 0.17
O00370 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.1■□□□□ 0.17
O00370 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
O00370 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
O00370 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
O00370 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.09■□□□□ 0.17
O00370 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.09■□□□□ 0.17
O00370 LRRC59-203ENST00000576448 1531 ntBASIC16.09■□□□□ 0.17
O00370 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
O00370 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
O00370 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
O00370 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
O00370 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.09■□□□□ 0.17
O00370 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
O00370 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
O00370 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
O00370 AC005229.1-201ENST00000392885 409 ntBASIC16.09■□□□□ 0.17
O00370 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
O00370 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.09■□□□□ 0.17
O00370 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.09■□□□□ 0.17
O00370 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
O00370 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.09■□□□□ 0.17
O00370 KRT17P7-201ENST00000451704 1104 ntBASIC16.09■□□□□ 0.17
O00370 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.09■□□□□ 0.17
O00370 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.09■□□□□ 0.17
O00370 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms