Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 GGCT-203ENST00000409144 836 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC144AA2RUR9 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC144AA2RUR9 PTPA-217ENST00000434095 870 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC144AA2RUR9 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC21.37■■□□□ 1.01
CCDC144AA2RUR9 AC012618.1-201ENST00000461223 412 ntBASIC21.37■■□□□ 1.01
CCDC144AA2RUR9 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC144AA2RUR9 TMBIM7P-202ENST00000641474 1516 ntBASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 HYMAI-201ENST00000635591 3347 ntBASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 PARVG-202ENST00000415224 999 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 RBM8B-201ENST00000555532 525 ntBASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 AC079336.7-201ENST00000623428 1078 ntBASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CCDC144AA2RUR9 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 F10-203ENST00000409306 1450 ntTSL 3 BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 AC006335.1-201ENST00000445200 547 ntBASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 AC134698.3-201ENST00000523880 214 ntBASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 MIR4754-201ENST00000582477 89 ntBASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 KRT8P21-201ENST00000430398 1491 ntBASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC144AA2RUR9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 LINC00528-201ENST00000600723 2160 ntBASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 AC020922.3-201ENST00000595064 547 ntBASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 MEG3_2.1-201ENST00000611456 105 ntBASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC144AA2RUR9 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC144AA2RUR9 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms