Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC21.92■■□□□ 1.1
HFM1A2PYH4 ACTG1P2-201ENST00000415776 1125 ntBASIC21.92■■□□□ 1.1
HFM1A2PYH4 ACTG1P11-201ENST00000425411 1125 ntBASIC21.92■■□□□ 1.1
HFM1A2PYH4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC21.92■■□□□ 1.1
HFM1A2PYH4 SPTLC1P5-201ENST00000450718 252 ntBASIC21.92■■□□□ 1.1
HFM1A2PYH4 AC104073.2-201ENST00000453737 312 ntBASIC21.92■■□□□ 1.1
HFM1A2PYH4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC21.92■■□□□ 1.1
HFM1A2PYH4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC21.92■■□□□ 1.1
HFM1A2PYH4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC21.92■■□□□ 1.1
HFM1A2PYH4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC21.92■■□□□ 1.1
HFM1A2PYH4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
HFM1A2PYH4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
HFM1A2PYH4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
HFM1A2PYH4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HFM1A2PYH4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HFM1A2PYH4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HFM1A2PYH4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC21.92■■□□□ 1.1
HFM1A2PYH4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HFM1A2PYH4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
HFM1A2PYH4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HFM1A2PYH4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HFM1A2PYH4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC21.92■■□□□ 1.1
HFM1A2PYH4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC21.92■■□□□ 1.1
HFM1A2PYH4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HFM1A2PYH4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
HFM1A2PYH4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
HFM1A2PYH4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
HFM1A2PYH4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HFM1A2PYH4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HFM1A2PYH4 SLC16A6P1-201ENST00000413214 1059 ntBASIC21.91■■□□□ 1.1
HFM1A2PYH4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC21.91■■□□□ 1.1
HFM1A2PYH4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC21.91■■□□□ 1.1
HFM1A2PYH4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC21.91■■□□□ 1.1
HFM1A2PYH4 RBM8B-201ENST00000555532 525 ntBASIC21.91■■□□□ 1.1
HFM1A2PYH4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HFM1A2PYH4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC21.91■■□□□ 1.1
HFM1A2PYH4 RN7SL163P-201ENST00000583100 276 ntBASIC21.91■■□□□ 1.1
HFM1A2PYH4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
HFM1A2PYH4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HFM1A2PYH4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
HFM1A2PYH4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HFM1A2PYH4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HFM1A2PYH4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HFM1A2PYH4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
HFM1A2PYH4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HFM1A2PYH4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HFM1A2PYH4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HFM1A2PYH4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HFM1A2PYH4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HFM1A2PYH4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HFM1A2PYH4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HFM1A2PYH4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC21.91■■□□□ 1.1
HFM1A2PYH4 OR6D1P-202ENST00000641007 5290 ntBASIC21.91■■□□□ 1.1
HFM1A2PYH4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HFM1A2PYH4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HFM1A2PYH4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
HFM1A2PYH4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HFM1A2PYH4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
HFM1A2PYH4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC21.9■■□□□ 1.1
HFM1A2PYH4 RCC2P8-201ENST00000502779 1035 ntBASIC21.9■■□□□ 1.1
HFM1A2PYH4 TUBBP5-203ENST00000508529 1334 ntBASIC21.9■■□□□ 1.1
HFM1A2PYH4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC21.9■■□□□ 1.1
HFM1A2PYH4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC21.9■■□□□ 1.1
HFM1A2PYH4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC21.9■■□□□ 1.1
HFM1A2PYH4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
HFM1A2PYH4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HFM1A2PYH4 AC008805.1-201ENST00000590892 364 ntBASIC21.9■■□□□ 1.1
HFM1A2PYH4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC21.9■■□□□ 1.1
HFM1A2PYH4 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HFM1A2PYH4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC21.9■■□□□ 1.1
HFM1A2PYH4 AL021578.1-201ENST00000613646 709 ntBASIC21.9■■□□□ 1.1
HFM1A2PYH4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HFM1A2PYH4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HFM1A2PYH4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
HFM1A2PYH4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HFM1A2PYH4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HFM1A2PYH4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC21.9■■□□□ 1.1
HFM1A2PYH4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC21.9■■□□□ 1.1
HFM1A2PYH4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HFM1A2PYH4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC21.9■■□□□ 1.1
HFM1A2PYH4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
HFM1A2PYH4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HFM1A2PYH4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
HFM1A2PYH4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HFM1A2PYH4 ELK2AP-201ENST00000392510 1007 ntBASIC21.89■■□□□ 1.1
HFM1A2PYH4 SLC25A24P2-201ENST00000415059 510 ntBASIC21.89■■□□□ 1.1
HFM1A2PYH4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC21.89■■□□□ 1.1
HFM1A2PYH4 EIF4HP1-201ENST00000453115 687 ntBASIC21.89■■□□□ 1.1
HFM1A2PYH4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC21.89■■□□□ 1.1
HFM1A2PYH4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC21.89■■□□□ 1.1
HFM1A2PYH4 AC022447.6-201ENST00000515522 438 ntBASIC21.89■■□□□ 1.1
HFM1A2PYH4 ADM-202ENST00000524948 584 ntTSL 2 BASIC21.89■■□□□ 1.1
HFM1A2PYH4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC21.89■■□□□ 1.1
HFM1A2PYH4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC21.89■■□□□ 1.1
HFM1A2PYH4 AC003686.1-201ENST00000550956 1034 ntBASIC21.89■■□□□ 1.1
HFM1A2PYH4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC21.89■■□□□ 1.1
HFM1A2PYH4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC21.89■■□□□ 1.1
HFM1A2PYH4 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC21.89■■□□□ 1.1
HFM1A2PYH4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
HFM1A2PYH4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms