Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MIR1909-201ENST00000411312 80 ntBASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 KRT18P43-201ENST00000469825 1281 ntBASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ENPP7P5-201ENST00000541031 1031 ntBASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 BRI3BPP1-201ENST00000594224 787 ntBASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 BTNL10-201ENST00000595971 695 ntBASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AL512343.1-201ENST00000605837 169 ntBASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AL391069.4-201ENST00000609583 481 ntBASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 INTS4P2-202ENST00000614726 2019 ntBASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
TCRBV4S1A1TA0A5B7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 CICP11-201ENST00000434745 2827 ntBASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC079776.1-201ENST00000401540 1152 ntBASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 BOLA2P3-201ENST00000404566 256 ntBASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 VDAC1P7-201ENST00000462417 847 ntBASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SLC25A47P1-201ENST00000531577 414 ntBASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC133552.6-201ENST00000613406 534 ntBASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 AC005912.2-201ENST00000619492 2400 ntBASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRBV4S1A1TA0A5B7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms