Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1G3Q9Y6M4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1G3Q9Y6M4 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1G3Q9Y6M4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.77□□□□□ -0.04
CSNK1G3Q9Y6M4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1G3Q9Y6M4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1G3Q9Y6M4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CSNK1G3Q9Y6M4 CLUHP2-201ENST00000426660 1303 ntBASIC14.77□□□□□ -0.04
CSNK1G3Q9Y6M4 AL360270.3-201ENST00000609118 1348 ntBASIC14.77□□□□□ -0.04
CSNK1G3Q9Y6M4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1G3Q9Y6M4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1G3Q9Y6M4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CSNK1G3Q9Y6M4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 AL354877.1-201ENST00000424412 413 ntBASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 AL023803.2-201ENST00000620080 638 ntBASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 AC092127.1-201ENST00000567093 3455 ntBASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 AC022532.1-201ENST00000624563 1728 ntBASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.77□□□□□ -0.05
CSNK1G3Q9Y6M4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 AC067930.6-201ENST00000623257 4947 ntBASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 AP000593.2-201ENST00000542775 1433 ntBASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 PPT1-215ENST00000641471 2368 ntBASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 AL008707.1-201ENST00000422498 534 ntBASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 GHSR-202ENST00000427970 912 ntBASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 HIST2H2BB-201ENST00000449108 381 ntBASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 AC005077.2-201ENST00000449786 690 ntBASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 SERPINA13P-202ENST00000478994 924 ntBASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 AP001002.3-201ENST00000623482 206 ntBASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1G3Q9Y6M4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1G3Q9Y6M4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CSNK1G3Q9Y6M4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1G3Q9Y6M4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CSNK1G3Q9Y6M4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1G3Q9Y6M4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.75□□□□□ -0.05
CSNK1G3Q9Y6M4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.75□□□□□ -0.05
CSNK1G3Q9Y6M4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1G3Q9Y6M4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CSNK1G3Q9Y6M4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1G3Q9Y6M4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CSNK1G3Q9Y6M4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1G3Q9Y6M4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms