Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 AC105917.1-201ENST00000506637 2539 ntBASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 RPS3-201ENST00000278572 907 ntTSL 3 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 TISP43-201ENST00000409793 538 ntTSL 4 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 RGS5-214ENST00000429865 754 ntTSL 3 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 AL591846.1-201ENST00000451736 433 ntBASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 AC104306.2-201ENST00000451877 341 ntBASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 AC244157.2-201ENST00000616239 1006 ntBASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 AC020907.1-201ENST00000616460 1350 ntBASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 REXO1L2P-201ENST00000425429 2069 ntBASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 PCDHA3-202ENST00000532566 4594 ntBASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 AC126755.1-201ENST00000525846 6405 ntBASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00588Q9Y4M8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 PPT1-215ENST00000641471 2368 ntBASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00588Q9Y4M8 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms