Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHF8Q9UPP1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PHF8Q9UPP1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHF8Q9UPP1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PHF8Q9UPP1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHF8Q9UPP1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC20.18■□□□□ 0.82
PHF8Q9UPP1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 AC090502.4-201ENST00000551714 1386 ntBASIC20.18■□□□□ 0.82
PHF8Q9UPP1 RN7SL832P-201ENST00000607781 1756 ntBASIC20.18■□□□□ 0.82
PHF8Q9UPP1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHF8Q9UPP1 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 RHEB-207ENST00000496004 744 ntTSL 2 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 MIR3180-2-201ENST00000581748 88 ntBASIC20.17■□□□□ 0.82
PHF8Q9UPP1 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PHF8Q9UPP1 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 IL9RP3-201ENST00000442856 1674 ntBASIC20.16■□□□□ 0.82
PHF8Q9UPP1 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 AC234644.1-201ENST00000406065 370 ntBASIC20.16■□□□□ 0.82
PHF8Q9UPP1 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 ALG1L6P-201ENST00000515248 758 ntBASIC20.16■□□□□ 0.82
PHF8Q9UPP1 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 NUDT4P2-201ENST00000578341 546 ntBASIC20.16■□□□□ 0.82
PHF8Q9UPP1 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 AC005041.3-201ENST00000606287 649 ntBASIC20.16■□□□□ 0.82
PHF8Q9UPP1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PHF8Q9UPP1 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms