Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.54□□□□□ -0.56
VGLL1Q99990 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VGLL1Q99990 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
VGLL1Q99990 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VGLL1Q99990 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
VGLL1Q99990 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VGLL1Q99990 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
VGLL1Q99990 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VGLL1Q99990 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.54□□□□□ -0.56
VGLL1Q99990 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VGLL1Q99990 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VGLL1Q99990 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VGLL1Q99990 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VGLL1Q99990 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
VGLL1Q99990 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
VGLL1Q99990 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
VGLL1Q99990 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.53□□□□□ -0.56
VGLL1Q99990 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.53□□□□□ -0.56
VGLL1Q99990 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
VGLL1Q99990 TP73-209ENST00000603362 1668 ntTSL 5 BASIC11.53□□□□□ -0.56
VGLL1Q99990 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.53□□□□□ -0.56
VGLL1Q99990 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.53□□□□□ -0.56
VGLL1Q99990 RPL30-202ENST00000396070 440 ntTSL 2 BASIC11.53□□□□□ -0.56
VGLL1Q99990 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
VGLL1Q99990 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
VGLL1Q99990 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 AL080243.2-201ENST00000418783 582 ntBASIC11.53□□□□□ -0.56
VGLL1Q99990 AC015922.1-201ENST00000421102 1152 ntBASIC11.53□□□□□ -0.56
VGLL1Q99990 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.53□□□□□ -0.56
VGLL1Q99990 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC11.53□□□□□ -0.56
VGLL1Q99990 SERBP1P3-201ENST00000459980 809 ntBASIC11.53□□□□□ -0.56
VGLL1Q99990 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC11.53□□□□□ -0.56
VGLL1Q99990 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 YBX1P5-201ENST00000509441 847 ntBASIC11.53□□□□□ -0.56
VGLL1Q99990 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 AP000344.2-201ENST00000512987 629 ntBASIC11.53□□□□□ -0.56
VGLL1Q99990 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.53□□□□□ -0.56
VGLL1Q99990 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC11.53□□□□□ -0.56
VGLL1Q99990 AC004835.2-201ENST00000603762 682 ntBASIC11.53□□□□□ -0.56
VGLL1Q99990 LINC01115-203ENST00000606068 577 ntBASIC11.53□□□□□ -0.56
VGLL1Q99990 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.53□□□□□ -0.56
VGLL1Q99990 AC009093.7-201ENST00000623853 1223 ntBASIC11.53□□□□□ -0.56
VGLL1Q99990 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.53□□□□□ -0.56
VGLL1Q99990 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
VGLL1Q99990 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.53□□□□□ -0.56
VGLL1Q99990 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC11.53□□□□□ -0.56
VGLL1Q99990 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
VGLL1Q99990 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 AC007787.1-201ENST00000588095 1583 ntBASIC11.53□□□□□ -0.56
VGLL1Q99990 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.53□□□□□ -0.56
VGLL1Q99990 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
VGLL1Q99990 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VGLL1Q99990 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
VGLL1Q99990 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
VGLL1Q99990 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.52□□□□□ -0.56
VGLL1Q99990 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
VGLL1Q99990 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
VGLL1Q99990 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.52□□□□□ -0.56
VGLL1Q99990 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
VGLL1Q99990 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.52□□□□□ -0.56
VGLL1Q99990 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
VGLL1Q99990 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.52□□□□□ -0.56
VGLL1Q99990 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
VGLL1Q99990 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.56
VGLL1Q99990 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.52□□□□□ -0.56
VGLL1Q99990 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
VGLL1Q99990 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
VGLL1Q99990 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.52□□□□□ -0.57
VGLL1Q99990 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
VGLL1Q99990 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms