Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SDHCQ99643 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SDHCQ99643 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13□□□□□ -0.33
SDHCQ99643 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SDHCQ99643 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13□□□□□ -0.33
SDHCQ99643 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SDHCQ99643 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13□□□□□ -0.33
SDHCQ99643 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13□□□□□ -0.33
SDHCQ99643 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SDHCQ99643 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SDHCQ99643 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13□□□□□ -0.33
SDHCQ99643 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SDHCQ99643 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.99□□□□□ -0.33
SDHCQ99643 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
SDHCQ99643 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.99□□□□□ -0.33
SDHCQ99643 AP001972.5-201ENST00000624624 2338 ntBASIC12.99□□□□□ -0.33
SDHCQ99643 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.99□□□□□ -0.33
SDHCQ99643 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.99□□□□□ -0.33
SDHCQ99643 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.99□□□□□ -0.33
SDHCQ99643 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.99□□□□□ -0.33
SDHCQ99643 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.99□□□□□ -0.33
SDHCQ99643 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
SDHCQ99643 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.99□□□□□ -0.33
SDHCQ99643 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.99□□□□□ -0.33
SDHCQ99643 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.99□□□□□ -0.33
SDHCQ99643 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.99□□□□□ -0.33
SDHCQ99643 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 RPS2P1-201ENST00000434010 821 ntBASIC12.99□□□□□ -0.33
SDHCQ99643 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.99□□□□□ -0.33
SDHCQ99643 PRSS29P-201ENST00000440800 595 ntBASIC12.99□□□□□ -0.33
SDHCQ99643 RNA5SP410-201ENST00000516285 106 ntBASIC12.99□□□□□ -0.33
SDHCQ99643 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
SDHCQ99643 AC105233.2-201ENST00000523697 349 ntBASIC12.99□□□□□ -0.33
SDHCQ99643 AF228730.5-201ENST00000530288 346 ntBASIC12.99□□□□□ -0.33
SDHCQ99643 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.99□□□□□ -0.33
SDHCQ99643 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.99□□□□□ -0.33
SDHCQ99643 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.99□□□□□ -0.33
SDHCQ99643 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.99□□□□□ -0.33
SDHCQ99643 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.99□□□□□ -0.33
SDHCQ99643 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.99□□□□□ -0.33
SDHCQ99643 MIR1199-201ENST00000621445 119 ntBASIC12.99□□□□□ -0.33
SDHCQ99643 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.99□□□□□ -0.33
SDHCQ99643 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SDHCQ99643 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.99□□□□□ -0.33
SDHCQ99643 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SDHCQ99643 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
SDHCQ99643 AC215219.1-201ENST00000400706 1817 ntBASIC12.99□□□□□ -0.33
SDHCQ99643 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SDHCQ99643 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.99□□□□□ -0.33
SDHCQ99643 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SDHCQ99643 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SDHCQ99643 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SDHCQ99643 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SDHCQ99643 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.99□□□□□ -0.33
SDHCQ99643 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.98□□□□□ -0.33
SDHCQ99643 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SDHCQ99643 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SDHCQ99643 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.98□□□□□ -0.33
SDHCQ99643 AC007326.2-201ENST00000624224 7579 ntBASIC12.98□□□□□ -0.33
SDHCQ99643 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SDHCQ99643 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SDHCQ99643 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.98□□□□□ -0.33
SDHCQ99643 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SDHCQ99643 AL157414.3-201ENST00000624276 1954 ntBASIC12.98□□□□□ -0.33
SDHCQ99643 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SDHCQ99643 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SDHCQ99643 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
SDHCQ99643 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.98□□□□□ -0.33
SDHCQ99643 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SDHCQ99643 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.98□□□□□ -0.33
SDHCQ99643 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.98□□□□□ -0.33
SDHCQ99643 AL445209.1-201ENST00000607269 3491 ntBASIC12.98□□□□□ -0.33
SDHCQ99643 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SDHCQ99643 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SDHCQ99643 AL360270.3-201ENST00000609118 1348 ntBASIC12.98□□□□□ -0.33
SDHCQ99643 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SDHCQ99643 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SDHCQ99643 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SDHCQ99643 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SDHCQ99643 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms