Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 VDAC1P1-201ENST00000439229 848 ntBASIC16.12■□□□□ 0.17
YME1L1Q96TA2 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 AL603832.2-201ENST00000566195 2125 ntBASIC16.12■□□□□ 0.17
YME1L1Q96TA2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
YME1L1Q96TA2 MBLAC2-202ENST00000514906 1936 ntBASIC16.11■□□□□ 0.17
YME1L1Q96TA2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 AC244394.1-201ENST00000435000 1665 ntBASIC16.11■□□□□ 0.17
YME1L1Q96TA2 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 AC024909.3-201ENST00000611513 2257 ntBASIC16.11■□□□□ 0.17
YME1L1Q96TA2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 CICP11-201ENST00000434745 2827 ntBASIC16.11■□□□□ 0.17
YME1L1Q96TA2 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 RN7SL818P-201ENST00000485099 259 ntBASIC16.11■□□□□ 0.17
YME1L1Q96TA2 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 AC009884.2-201ENST00000603110 324 ntBASIC16.11■□□□□ 0.17
YME1L1Q96TA2 RN7SL725P-201ENST00000606439 259 ntBASIC16.11■□□□□ 0.17
YME1L1Q96TA2 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 AL805961.1-201ENST00000642026 753 ntBASIC16.11■□□□□ 0.17
YME1L1Q96TA2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
YME1L1Q96TA2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms