Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 AC004945.1-201ENST00000416738 983 ntBASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 MTX1P1-201ENST00000440904 838 ntBASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 FAM86HP-204ENST00000513466 959 ntBASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 MIR4741-201ENST00000579822 90 ntBASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK5RAP1Q96SZ6 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 RN7SKP175-201ENST00000408472 289 ntBASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 MIR1908-201ENST00000410394 80 ntBASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 AC006486.2-201ENST00000624246 2199 ntBASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 AL138725.1-201ENST00000407347 1314 ntBASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 MIR600HG-201ENST00000449175 5984 ntBASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 AL023775.1-201ENST00000454907 1746 ntBASIC15.63■□□□□ 0.09
CDK5RAP1Q96SZ6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDK5RAP1Q96SZ6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms