Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 SPDYE17-201ENST00000412399 783 ntBASIC12.31□□□□□ -0.44
RAB40CQ96S21 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.31□□□□□ -0.44
RAB40CQ96S21 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB40CQ96S21 AC018665.1-201ENST00000622927 1362 ntBASIC12.3□□□□□ -0.44
RAB40CQ96S21 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 HIST3H2BA-201ENST00000436555 524 ntBASIC12.3□□□□□ -0.44
RAB40CQ96S21 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 RARRES2P9-201ENST00000565168 469 ntBASIC12.3□□□□□ -0.44
RAB40CQ96S21 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.3□□□□□ -0.44
RAB40CQ96S21 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB40CQ96S21 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB40CQ96S21 CICP17-201ENST00000418553 2377 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 230.6 ms