Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 BANF1P3-201ENST00000412556 261 ntBASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 AC006483.2-201ENST00000609813 515 ntBASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 AC005962.1-201ENST00000584100 773 ntBASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 FKBP4P6-201ENST00000457486 1332 ntBASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CSMD1Q96PZ7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 AC026434.2-201ENST00000506094 1078 ntBASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 AC022616.1-201ENST00000518688 554 ntBASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 AC124068.2-201ENST00000569473 1109 ntBASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 AP005264.6-204ENST00000588436 719 ntBASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 AC140113.1-201ENST00000603467 169 ntBASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 AC138696.2-201ENST00000607376 223 ntBASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 SURF4-203ENST00000371991 715 ntTSL 3 BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 AL138725.1-201ENST00000407347 1314 ntBASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 AC023906.1-201ENST00000486386 453 ntBASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 AC113347.2-201ENST00000512350 279 ntBASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 NHP2P1-201ENST00000335274 462 ntBASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 FTH1P22-201ENST00000456305 520 ntBASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CSMD1Q96PZ7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 AL592076.1-201ENST00000424448 303 ntBASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 FRMPD2B-201ENST00000431305 1347 ntBASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CSMD1Q96PZ7 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms