Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC055811.3-201ENST00000584952 686 ntBASIC16.25■□□□□ 0.19
LRCH3Q96II8 HMGB1P24-201ENST00000611897 328 ntBASIC16.25■□□□□ 0.19
LRCH3Q96II8 MIR6769A-201ENST00000617340 73 ntBASIC16.25■□□□□ 0.19
LRCH3Q96II8 AQP7P3-201ENST00000624547 1041 ntBASIC16.25■□□□□ 0.19
LRCH3Q96II8 AL645728.2-202ENST00000641679 227 ntBASIC16.25■□□□□ 0.19
LRCH3Q96II8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH3Q96II8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH3Q96II8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.25■□□□□ 0.19
LRCH3Q96II8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LRCH3Q96II8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH3Q96II8 KRT8P14-201ENST00000414254 1442 ntBASIC16.25■□□□□ 0.19
LRCH3Q96II8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH3Q96II8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH3Q96II8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
LRCH3Q96II8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
LRCH3Q96II8 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.25■□□□□ 0.19
LRCH3Q96II8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.25■□□□□ 0.19
LRCH3Q96II8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.25■□□□□ 0.19
LRCH3Q96II8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH3Q96II8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.25■□□□□ 0.19
LRCH3Q96II8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.25■□□□□ 0.19
LRCH3Q96II8 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 AC006518.1-201ENST00000541449 943 ntBASIC16.24■□□□□ 0.19
LRCH3Q96II8 CR383656.3-201ENST00000551315 183 ntBASIC16.24■□□□□ 0.19
LRCH3Q96II8 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 AC138466.3-201ENST00000619983 221 ntBASIC16.24■□□□□ 0.19
LRCH3Q96II8 AL451007.2-201ENST00000632004 563 ntBASIC16.24■□□□□ 0.19
LRCH3Q96II8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 E2F3P2-201ENST00000447755 1422 ntBASIC16.24■□□□□ 0.19
LRCH3Q96II8 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.24■□□□□ 0.19
LRCH3Q96II8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH3Q96II8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH3Q96II8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH3Q96II8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRCH3Q96II8 AL365203.3-201ENST00000609742 2057 ntBASIC16.23■□□□□ 0.19
LRCH3Q96II8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH3Q96II8 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.23■□□□□ 0.19
LRCH3Q96II8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.23■□□□□ 0.19
LRCH3Q96II8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.23■□□□□ 0.19
LRCH3Q96II8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH3Q96II8 AC018892.3-201ENST00000623986 2499 ntBASIC16.23■□□□□ 0.19
LRCH3Q96II8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.23■□□□□ 0.19
LRCH3Q96II8 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH3Q96II8 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH3Q96II8 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH3Q96II8 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.23■□□□□ 0.19
LRCH3Q96II8 AL645933.1-201ENST00000440087 609 ntBASIC16.23■□□□□ 0.19
LRCH3Q96II8 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH3Q96II8 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.23■□□□□ 0.19
LRCH3Q96II8 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.23■□□□□ 0.19
LRCH3Q96II8 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.23■□□□□ 0.19
LRCH3Q96II8 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.23■□□□□ 0.19
LRCH3Q96II8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
LRCH3Q96II8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRCH3Q96II8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.23■□□□□ 0.19
LRCH3Q96II8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRCH3Q96II8 FAM90A7P-201ENST00000382628 1395 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms