Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 Z82170.1-201ENST00000625081 3192 ntBASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 AL135744.1-201ENST00000565098 629 ntBASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 AC074044.1-201ENST00000609673 707 ntBASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.93□□□□□ -0.34
SMIM4Q8WVI0 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 AL360270.3-201ENST00000609118 1348 ntBASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 MIR346-201ENST00000362234 95 ntBASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SMIM4Q8WVI0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms