Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 PCDHA3-202ENST00000532566 4594 ntBASIC15.44■□□□□ 0.06
PTCD2Q8WV60 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 LINC00469-201ENST00000321800 708 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 AL645937.2-201ENST00000396808 931 ntBASIC15.43■□□□□ 0.06
PTCD2Q8WV60 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 AC012454.1-201ENST00000443948 995 ntBASIC15.43■□□□□ 0.06
PTCD2Q8WV60 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 AC104596.2-201ENST00000512793 793 ntBASIC15.43■□□□□ 0.06
PTCD2Q8WV60 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 ATOX1-206ENST00000522710 591 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 AC115989.2-201ENST00000578640 563 ntBASIC15.43■□□□□ 0.06
PTCD2Q8WV60 BRI3BPP1-201ENST00000594224 787 ntBASIC15.43■□□□□ 0.06
PTCD2Q8WV60 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.43■□□□□ 0.06
PTCD2Q8WV60 AL360270.3-201ENST00000609118 1348 ntBASIC15.43■□□□□ 0.06
PTCD2Q8WV60 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.42■□□□□ 0.06
PTCD2Q8WV60 VDAC1P7-201ENST00000462417 847 ntBASIC15.42■□□□□ 0.06
PTCD2Q8WV60 RPL13AP25-201ENST00000484130 612 ntBASIC15.42■□□□□ 0.06
PTCD2Q8WV60 MTND2P31-201ENST00000512602 616 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms