Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 SCARNA12-201ENST00000459155 270 ntBASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 AC108724.1-201ENST00000481669 352 ntBASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 RPS23-207ENST00000511844 530 ntTSL 2 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 AC092612.1-201ENST00000514501 998 ntBASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 AC007250.1-201ENST00000608934 338 ntBASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 BRD7P5-201ENST00000299197 1822 ntBASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 AC105250.1-201ENST00000509378 2057 ntBASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 SEPHS2P1-201ENST00000511618 1162 ntBASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 AC092862.1-201ENST00000541534 533 ntBASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 MIR4746-201ENST00000579802 71 ntBASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 AC006372.4-201ENST00000624122 1543 ntBASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 NQO2-204ENST00000380454 851 ntTSL 2 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 AC073869.2-201ENST00000417338 1026 ntBASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 PPP1R2P4-201ENST00000424051 595 ntBASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 KRT8P30-201ENST00000432100 650 ntBASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 AC025186.1-201ENST00000478174 870 ntBASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 RPS18P9-201ENST00000482817 460 ntBASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 AL513477.1-201ENST00000602865 2407 ntBASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 CCL25-202ENST00000315626 450 ntTSL 2 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 HNRNPA1P2-207ENST00000432375 960 ntBASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 AC006328.1-201ENST00000437571 379 ntBASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 GOLGA6L16P-201ENST00000441780 1299 ntBASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 AC023906.1-201ENST00000486386 453 ntBASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC9.81□□□□□ -0.84
ALMS1Q8TCU4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms