Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 KRT8P14-201ENST00000414254 1442 ntBASIC14.17□□□□□ -0.14
NUP43Q8NFH3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 AC140479.7-201ENST00000636301 2332 ntBASIC14.17□□□□□ -0.14
NUP43Q8NFH3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 RNU1-114P-201ENST00000365297 166 ntBASIC14.17□□□□□ -0.14
NUP43Q8NFH3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 PIN1P1-201ENST00000412108 996 ntBASIC14.17□□□□□ -0.14
NUP43Q8NFH3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 AC114812.1-204ENST00000449669 728 ntBASIC14.17□□□□□ -0.14
NUP43Q8NFH3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 LINC02084-201ENST00000606069 1096 ntBASIC14.17□□□□□ -0.14
NUP43Q8NFH3 AC008494.3-201ENST00000606615 944 ntBASIC14.17□□□□□ -0.14
NUP43Q8NFH3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NUP43Q8NFH3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 AL009178.2-201ENST00000597278 2719 ntBASIC14.16□□□□□ -0.14
NUP43Q8NFH3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 AC140912.1-201ENST00000577171 1054 ntBASIC14.16□□□□□ -0.14
NUP43Q8NFH3 CTBP2P3-201ENST00000585629 1255 ntBASIC14.16□□□□□ -0.14
NUP43Q8NFH3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.16□□□□□ -0.14
NUP43Q8NFH3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 AC023090.2-201ENST00000625182 2110 ntBASIC14.16□□□□□ -0.14
NUP43Q8NFH3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NUP43Q8NFH3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NUP43Q8NFH3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms