Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 TCAF2P1-201ENST00000291129 2421 ntBASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 AL157414.3-201ENST00000624276 1954 ntBASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB42Q8N4Z0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 AL137783.1-201ENST00000623494 1896 ntBASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 AC018665.1-201ENST00000622927 1362 ntBASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB42Q8N4Z0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 AC234783.1-201ENST00000441761 496 ntBASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 BCRP2-202ENST00000447763 634 ntBASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 BCRP6-201ENST00000510112 632 ntBASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 BCRP7-201ENST00000511549 544 ntBASIC14.71□□□□□ -0.05
RAB42Q8N4Z0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms