Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ARHGEF39Q8N4T4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
ARHGEF39Q8N4T4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.19□□□□□ -0.14
ARHGEF39Q8N4T4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ARHGEF39Q8N4T4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.19□□□□□ -0.14
ARHGEF39Q8N4T4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ARHGEF39Q8N4T4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ARHGEF39Q8N4T4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ARHGEF39Q8N4T4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 HOMER2P2-201ENST00000451621 847 ntBASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 GCOM2-201ENST00000509133 1104 ntBASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 MIR4741-201ENST00000579822 90 ntBASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 EEF1DP1-201ENST00000585891 896 ntBASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 AL358472.3-201ENST00000608147 415 ntBASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 BX088702.1-201ENST00000610784 235 ntBASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 AC068587.6-202ENST00000641839 5619 ntBASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
ARHGEF39Q8N4T4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 HIST2H2BB-201ENST00000449108 381 ntBASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 RPSAP36-202ENST00000494591 1261 ntBASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 RN7SL560P-201ENST00000577943 264 ntBASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 CICP23-201ENST00000605013 2741 ntBASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 KRT8P4-201ENST00000509735 1454 ntBASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ARHGEF39Q8N4T4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms