Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 HLA-K-203ENST00000430151 1046 ntBASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 AC140912.1-201ENST00000577171 1054 ntBASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
CCDC116Q8IYX3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 TP53TG3HP-202ENST00000569755 579 ntBASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 WFDC1-204ENST00000613603 549 ntBASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 AC099063.4-201ENST00000641099 1602 ntBASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC116Q8IYX3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC116Q8IYX3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms