Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 CROCCP4-201ENST00000457096 498 ntBASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 FTH1P14-201ENST00000482930 551 ntBASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 AC025279.2-201ENST00000569730 653 ntBASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 AC132938.4-201ENST00000623835 848 ntBASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 AC018529.2-202ENST00000611482 3087 ntBASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.89■□□□□ 0.14
SCUBE3Q8IX30 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.89■□□□□ 0.14
SCUBE3Q8IX30 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SCUBE3Q8IX30 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 AC013726.1-201ENST00000563747 2285 ntBASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 AC007686.3-201ENST00000619017 3487 ntBASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 AC112492.5-201ENST00000421897 457 ntBASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 AC016694.1-201ENST00000434179 700 ntBASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 FO681548.1-201ENST00000455617 1132 ntBASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 AC007551.1-201ENST00000457394 519 ntBASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 KRT17P8-201ENST00000540749 863 ntBASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 AC244669.2-201ENST00000612320 853 ntBASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 AL603764.1-201ENST00000636452 321 ntBASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 CICP23-201ENST00000605013 2741 ntBASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 AC106881.1-201ENST00000605849 3329 ntBASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SCUBE3Q8IX30 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SCUBE3Q8IX30 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms