Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 AC138969.3-201ENST00000546612 1459 ntBASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 AC138932.2-201ENST00000548268 1459 ntBASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 AC126755.4-201ENST00000549796 1459 ntBASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CRLF3Q8IUI8 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 AL359881.3-201ENST00000602640 1721 ntBASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 BASP1P1-201ENST00000430708 665 ntBASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 RNA5SP421-201ENST00000516864 134 ntBASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CRLF3Q8IUI8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 AC015802.1-201ENST00000588104 1449 ntBASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 AL158211.3-201ENST00000607385 239 ntBASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 AL390754.1-201ENST00000619088 582 ntBASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CRLF3Q8IUI8 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CRLF3Q8IUI8 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms